Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Chitinophagia
Order
Chitinophagales
Family
Chitinophagaceae
Genus
Dinghuibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Chitinophagia |
| Order | Chitinophagales |
| Family | Chitinophagaceae |
| Genus | Dinghuibacter |
| Species | Dinghuibacter silviterrae |
| Strain | strain DSM 100059 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1446260 bp
Thymine Count
1427555 bp
Guanine Count
1808983 bp
Cytosine Count
1814377 bp
Genome Length
6497175 bp
Protein-coding Genes
5399 genes
Non-Coding Genes
48 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| adenosylmethionine-8-amino-7-oxononanoate aminotransferase | EDB95_1797 | Not Available | Negative | 1973291 - 1974565 | 46934.3 |
| rna polymerase sigma-70 factor (ecf subfamily) | EDB95_1798 | Not Available | Positive | 1974638 - 1975204 | 21574.7 |
| hypothetical protein | EDB95_1799 | Not Available | Positive | 1975272 - 1976732 | 50643.7 |
| hypothetical protein | EDB95_1800 | Not Available | Positive | 1976729 - 1977358 | 22681.0 |
| epoxyqueuosine reductase | EDB95_1801 | Not Available | Negative | 1977306 - 1978271 | 36255.4 |
| atp-dependent clp protease atp-binding subunit clpb | EDB95_1802 | Not Available | Positive | 1978428 - 1981028 | 97236.5 |
| putative membrane protein ypha (doxx/surf4 family) | EDB95_1803 | Not Available | Negative | 1981025 - 1981462 | 16302.3 |
| hypothetical protein | EDB95_1804 | Not Available | Positive | 1981553 - 1982638 | 40444.4 |
| guanine deaminase | EDB95_1805 | Not Available | Positive | 1982641 - 1983120 | 17377.8 |
| hypothetical protein | EDB95_1806 | Not Available | Negative | 1983117 - 1983446 | 12554.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
