Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Chitinophagia
Order
Chitinophagales
Family
Chitinophagaceae
Genus
Dinghuibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Chitinophagia |
| Order | Chitinophagales |
| Family | Chitinophagaceae |
| Genus | Dinghuibacter |
| Species | Dinghuibacter silviterrae |
| Strain | strain DSM 100059 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1446260 bp
Thymine Count
1427555 bp
Guanine Count
1808983 bp
Cytosine Count
1814377 bp
Genome Length
6497175 bp
Protein-coding Genes
5399 genes
Non-Coding Genes
48 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| zn-dependent m28 family amino/carboxypeptidase | EDB95_1756 | Not Available | Positive | 1927884 - 1929167 | 46530.2 |
| aconitase | EDB95_1757 | Not Available | Negative | 1929237 - 1931501 | 81324.2 |
| phage shock protein c (pspc) family protein | EDB95_1758 | Not Available | Positive | 1931609 - 1931830 | 8964.19 |
| hypothetical protein | EDB95_1759 | Not Available | Negative | 1932158 - 1932583 | 16090.0 |
| n-acetylglutamate synthase-like gnat family acetyltransferase | EDB95_1760 | Not Available | Negative | 1932618 - 1933076 | 17153.7 |
| 2-dehydro-3-deoxyphosphooctonate aldolase (kdo 8-p synthase) | EDB95_1761 | Not Available | Negative | 1933076 - 1933900 | 29834.1 |
| nucleoside-diphosphate-sugar epimerase | EDB95_1762 | Not Available | Positive | 1933950 - 1934909 | 35792.0 |
| hypothetical protein | EDB95_1763 | Not Available | Negative | 1934893 - 1935642 | 29250.6 |
| Trna-pseudo | Not Available | Not Available | Positive | 1935818 - 1935888 | Not Available |
| glycosyl hydrolase family 79 | EDB95_1765 | Not Available | Negative | 1935974 - 1937413 | 51004.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
