Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Actinophytocola
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Actinophytocola |
| Species | Actinophytocola oryzae |
| Strain | strain DSM 45499 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | Not Available |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1575419 bp
Thymine Count
1584210 bp
Guanine Count
3779002 bp
Cytosine Count
3767380 bp
Genome Length
10706011 bp
Protein-coding Genes
9418 genes
Non-Coding Genes
112 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| methionyl aminopeptidase | CLV71_112278 | Not Available | Positive | 6881750 - 6882565 | 28495.0 |
| translation initiation factor 1 (bif-1) | CLV71_112279 | Not Available | Positive | 6882864 - 6883085 | 8461.41 |
| lsu ribosomal protein l36p | CLV71_112280 | Not Available | Positive | 6883111 - 6883224 | 4403.67 |
| ssu ribosomal protein s13p | CLV71_112281 | Not Available | Positive | 6883373 - 6883753 | 14430.6 |
| hypothetical protein | CLV71_112282 | Not Available | Positive | 6883750 - 6883935 | 6764.99 |
| ssu ribosomal protein s11p | CLV71_112283 | Not Available | Positive | 6883954 - 6884361 | 14483.4 |
| small subunit ribosomal protein s4 | CLV71_112284 | Not Available | Positive | 6884383 - 6884988 | 23228.2 |
| dna-directed rna polymerase subunit alpha | CLV71_112285 | Not Available | Positive | 6885081 - 6886139 | 38008.9 |
| large subunit ribosomal protein l17 | CLV71_112286 | Not Available | Positive | 6886139 - 6886867 | 26456.5 |
| trna pseudouridine38-40 synthase | CLV71_112287 | Not Available | Positive | 6886897 - 6887694 | 29236.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
