Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Actinophytocola
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Actinophytocola |
| Species | Actinophytocola oryzae |
| Strain | strain DSM 45499 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | Not Available |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1575419 bp
Thymine Count
1584210 bp
Guanine Count
3779002 bp
Cytosine Count
3767380 bp
Genome Length
10706011 bp
Protein-coding Genes
9418 genes
Non-Coding Genes
112 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| polysaccharide lyase family 4-like protein | CLV71_101522 | Not Available | Positive | 621342 - 624122 | 98147.3 |
| carbohydrate abc transporter substrate-binding protein (cut1 family) | CLV71_101523 | Not Available | Positive | 624153 - 625412 | 44203.2 |
| carbohydrate abc transporter membrane protein 1 (cut1 family) | CLV71_101524 | Not Available | Positive | 625435 - 626310 | 31747.4 |
| carbohydrate abc transporter membrane protein 2 (cut1 family) | CLV71_101525 | Not Available | Positive | 626307 - 627125 | 29997.4 |
| nucleoside-diphosphate-sugar epimerase | CLV71_101526 | Not Available | Positive | 627122 - 627925 | 27792.3 |
| galactonate dehydratase | CLV71_101527 | Not Available | Positive | 627925 - 629061 | 40321.9 |
| parallel beta helix pectate lyase-like protein | CLV71_101528 | Not Available | Negative | 629185 - 630744 | 53781.3 |
| galactan endo-1,6-beta-galactosidase | CLV71_101529 | Not Available | Negative | 630964 - 632418 | 52501.9 |
| hypothetical protein | CLV71_101530 | Not Available | Negative | 632695 - 633027 | 11563.6 |
| uncharacterized protein ybci | CLV71_101531 | Not Available | Negative | 633083 - 633451 | 13290.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
