Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Actinophytocola
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Actinophytocola |
| Species | Actinophytocola oryzae |
| Strain | strain DSM 45499 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | Not Available |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1575419 bp
Thymine Count
1584210 bp
Guanine Count
3779002 bp
Cytosine Count
3767380 bp
Genome Length
10706011 bp
Protein-coding Genes
9418 genes
Non-Coding Genes
112 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| udp-n-acetylmuramoylalanine--d-glutamate ligase | CLV71_111266 | Not Available | Negative | 6495044 - 6496384 | 45372.9 |
| phospho-n-acetylmuramoyl-pentapeptide- transferase | CLV71_111267 | Not Available | Negative | 6496386 - 6497474 | 38840.1 |
| udp-n-acetylmuramoyl-tripeptide--d-alanyl-d- alanine ligase | CLV71_111268 | Not Available | Negative | 6497563 - 6499014 | 49211.6 |
| udp-n-acetylmuramoylalanyl-d-glutamate--2, 6-diaminopimelate ligase | CLV71_111269 | Not Available | Negative | 6499184 - 6500764 | 55025.2 |
| membrane associated rhomboid family serine protease | CLV71_111270 | Not Available | Negative | 6500799 - 6501467 | 22712.0 |
| tetr family transcriptional regulator | CLV71_111271 | Not Available | Negative | 6501515 - 6502300 | 29121.8 |
| excinuclease abc a subunit | CLV71_111272 | Not Available | Positive | 6502372 - 6504639 | 81390.4 |
| nadph-dependent ferric siderophore reductase | CLV71_111273 | Not Available | Positive | 6504636 - 6505439 | 29211.0 |
| putative zn finger protein | CLV71_111274 | Not Available | Negative | 6505903 - 6507441 | 55584.1 |
| haloalkane dehalogenase | CLV71_111275 | Not Available | Negative | 6507479 - 6508363 | 31937.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
