Actinophytocola oryzae strain DSM 45499

aerobic

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Pseudonocardiales

Family

Pseudonocardiaceae

Genus

Actinophytocola

Description

Actinophytocola oryzae strain DSM 45499 is a Gram-positive, aerobic bacterium characterized by its non-motile nature. This strain is classified as mesophilic, with an optimal growth temperature of 25°C, indicating that it thrives in moderate temperature ranges typical of many environments. Notably, Actinophytocola oryzae is spore-forming, which suggests an adaptation for survival in fluctuating environmental conditions, allowing it to endure stressors that may be detrimental to other microbial species. The organism possesses a single replicon, which is indicative of its genetic structure and may play a role in its reproductive and metabolic processes. The accession number for this strain is SOCP00000000.1, which serves as a reference for its genetic data. In ecological contexts, the ability of Actinophytocola oryzae to form spores may enhance its role in nutrient cycling within its habitat, potentially contributing to soil health and plant growth. As a member of the microbial community, it could interact with other microorganisms and plants, influencing various biological processes. The strain's aerobic requirements also suggest its involvement in aerobic metabolic pathways, which are crucial for the breakdown of organic matter in aerobic environments. Overall, Actinophytocola oryzae strain DSM 45499 exemplifies the complex interactions that microorganisms have within their ecosystems, particularly in relation to their survival strategies and ecological contributions.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderPseudonocardiales
FamilyPseudonocardiaceae
GenusActinophytocola
SpeciesActinophytocola oryzae
Strainstrain DSM 45499

Profile

Physiology
Gram staining propertiesGram-positive
ShapeNot Available
Mobilitynon-motile
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsaerobic
Optimal temperature25
Temperature rangemesophilic
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
Sporulationspore-forming
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Actinophytocola oryzae strain DSM 45499 Ga0181036_152, whole

Gene Summary

Adenine Count

1575419 bp

Thymine Count

1584210 bp

Guanine Count

3779002 bp

Cytosine Count

3767380 bp

Genome Length

10706011 bp

Protein-coding Genes

9418 genes

Non-Coding Genes

112 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
grpb proteinCLV71_108326Not AvailablePositive5363096 - 53632546100.27
leader peptidase (prepilin peptidase)/n-methyltransferaseCLV71_108327Not AvailablePositive5363446 - 536396717988.4
endonuclease/exonuclease/phosphatase family metal-dependent hydrolaseCLV71_108328Not AvailableNegative5364026 - 536512038936.1
chorismate synthaseCLV71_108329Not AvailablePositive5365514 - 536669541708.7
shikimate kinaseCLV71_108330Not AvailablePositive5366692 - 536720418203.0
3-dehydroquinate synthaseCLV71_108331Not AvailablePositive5367293 - 536837837631.3
3-dehydroquinate dehydrataseCLV71_108332Not AvailablePositive5368399 - 536882715505.5
rimj/riml family protein n-acetyltransferaseCLV71_108333Not AvailablePositive5368824 - 536967831367.9
hypothetical proteinCLV71_108334Not AvailablePositive5369755 - 537127253300.7
hypothetical proteinCLV71_108335Not AvailableNegative5371233 - 537167314849.7

Displaying genes 4771 – 4780 of 9530 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.