Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Actinophytocola
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Actinophytocola |
| Species | Actinophytocola oryzae |
| Strain | strain DSM 45499 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | Not Available |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1575419 bp
Thymine Count
1584210 bp
Guanine Count
3779002 bp
Cytosine Count
3767380 bp
Genome Length
10706011 bp
Protein-coding Genes
9418 genes
Non-Coding Genes
112 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| carbohydrate abc transporter substrate-binding protein (cut1 family) | CLV71_108236 | Not Available | Positive | 5268498 - 5269811 | 47115.5 |
| carbohydrate abc transporter membrane protein 1 (cut1 family) | CLV71_108237 | Not Available | Positive | 5269804 - 5270751 | 34699.8 |
| carbohydrate abc transporter membrane protein 2 (cut1 family) | CLV71_108238 | Not Available | Positive | 5270748 - 5271596 | 30787.3 |
| beta-mannosidase | CLV71_108239 | Not Available | Positive | 5271621 - 5274089 | 90959.0 |
| polyhydroxybutyrate depolymerase | CLV71_108240 | Not Available | Negative | 5274077 - 5275411 | 46271.0 |
| mannan endo-1,4-beta-mannosidase | CLV71_108241 | Not Available | Negative | 5275475 - 5276875 | 50313.8 |
| mannan endo-1,4-beta-mannosidase | CLV71_108242 | Not Available | Negative | 5276916 - 5278346 | 51538.9 |
| Trna-val | Not Available | Not Available | Positive | 5278990 - 5279064 | Not Available |
| hypothetical protein | CLV71_108244 | Not Available | Negative | 5279197 - 5280624 | 51404.1 |
| uncharacterized protein (duf305 family) | CLV71_108245 | Not Available | Positive | 5280717 - 5281400 | 24685.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
