Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Actinophytocola
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Actinophytocola |
| Species | Actinophytocola oryzae |
| Strain | strain DSM 45499 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | Not Available |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1575419 bp
Thymine Count
1584210 bp
Guanine Count
3779002 bp
Cytosine Count
3767380 bp
Genome Length
10706011 bp
Protein-coding Genes
9418 genes
Non-Coding Genes
112 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 23s rrna (guanosine2251-2'-o)-methyltransferase | CLV71_105626 | Not Available | Negative | 4000134 - 4000853 | 25141.6 |
| hypothetical protein | CLV71_105627 | Not Available | Positive | 4000895 - 4001443 | 19261.8 |
| dna-binding sarp family transcriptional activator | CLV71_105628 | Not Available | Positive | 4001583 - 4004492 | 104359.0 |
| hypothetical protein | CLV71_105629 | Not Available | Positive | 4004637 - 4005275 | 22251.5 |
| preprotein translocase subunit seca | CLV71_105630 | Not Available | Negative | 4005338 - 4008220 | 108041.0 |
| ssu ribosomal protein s30p /sigma 54 modulation protein | CLV71_105631 | Not Available | Negative | 4008419 - 4009090 | 25268.9 |
| putative amidophosphoribosyltransferase | CLV71_105632 | Not Available | Positive | 4009634 - 4010251 | 20950.6 |
| sporulation and spore germination protein | CLV71_105633 | Not Available | Negative | 4010303 - 4012051 | 63195.7 |
| rna polymerase sigma-70 factor (sigma-e family) | CLV71_1061 | Not Available | Negative | 4012284 - 4012808 | 20014.7 |
| tetr family transcriptional regulator | CLV71_1062 | Not Available | Negative | 4012847 - 4013434 | 21481.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
