Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Actinophytocola
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Actinophytocola |
| Species | Actinophytocola oryzae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | Not Available |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Actinophytocola oryzae strain DSM 45499
Accession NumberSOCP00000000.1
Gene Summary
Adenine Count
1575419 bp
Thymine Count
1584210 bp
Guanine Count
3779002 bp
Cytosine Count
3767380 bp
Genome Length
10706011 bp
Protein-coding Genes
9418 genes
Non-Coding Genes
112 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| Tail assembly chaperone | CLV71_10984 | Not Available | + | 5523352 - 5523699 | 12574.8 |
| Tapemeasure protein | CLV71_10985 | Not Available | + | 5523696 - 5525465 | 60200.9 |
| Minor tail protein | CLV71_10986 | Not Available | + | 5525536 - 5526387 | 30216.8 |
| Hypothetical protein | CLV71_10987 | Not Available | + | 5526405 - 5527397 | 35024.5 |
| Minor tail protein | CLV71_10988 | Not Available | + | 5527400 - 5528485 | 38465.1 |
| Ncrna_class:autocatalytically_spliced_intron | Not Available | Not Available | + | 166 - 229 | Not Available |
| winged helix dna-binding protein | CLV71_1011 | Not Available | - | 406 - 1518 | 39771.4 |
| putative dna-binding transcriptional regulator yafy | CLV71_1012 | Not Available | + | 1580 - 2521 | 34124.9 |
| 23s ribosomal rna | Not Available | Not Available | + | 1902 - 5023 | Not Available |
| Ncrna_class:autocatalytically_spliced_intron | Not Available | Not Available | + | 1980 - 2115 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.