Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Actinophytocola
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Actinophytocola |
| Species | Actinophytocola oryzae |
| Strain | strain DSM 45499 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | Not Available |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1575419 bp
Thymine Count
1584210 bp
Guanine Count
3779002 bp
Cytosine Count
3767380 bp
Genome Length
10706011 bp
Protein-coding Genes
9418 genes
Non-Coding Genes
112 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| oxygen-dependent protoporphyrinogen oxidase | CLV71_103679 | Not Available | Negative | 2544358 - 2545752 | 48095.9 |
| uroporphyrinogen decarboxylase | CLV71_103680 | Not Available | Negative | 2545841 - 2546905 | 37942.6 |
| protein of unknown function (duf3000) | CLV71_103681 | Not Available | Positive | 2547119 - 2547604 | 17119.1 |
| uncharacterized protein duf397 | CLV71_103682 | Not Available | Positive | 2547683 - 2547862 | 6196.49 |
| membrane dipeptidase | CLV71_103683 | Not Available | Negative | 2547919 - 2549067 | 41108.4 |
| luxr family two component transcriptional regulator | CLV71_103684 | Not Available | Positive | 2549385 - 2550038 | 22794.5 |
| ribonuclease d | CLV71_103685 | Not Available | Positive | 2550247 - 2551404 | 42150.0 |
| uncharacterized protein yece (duf72 family) | CLV71_103686 | Not Available | Positive | 2551502 - 2552176 | 25908.6 |
| signal transduction histidine kinase | CLV71_103687 | Not Available | Negative | 2552189 - 2553316 | 39420.6 |
| dna-binding response ompr family regulator | CLV71_103688 | Not Available | Negative | 2553313 - 2553987 | 24092.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
