Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Actinophytocola
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Actinophytocola |
| Species | Actinophytocola oryzae |
| Strain | strain DSM 45499 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | Not Available |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1575419 bp
Thymine Count
1584210 bp
Guanine Count
3779002 bp
Cytosine Count
3767380 bp
Genome Length
10706011 bp
Protein-coding Genes
9418 genes
Non-Coding Genes
112 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nucleoside-diphosphate-sugar epimerase | CLV71_102442 | Not Available | Negative | 1509521 - 1510552 | 36931.0 |
| hypothetical protein | CLV71_102443 | Not Available | Negative | 1510549 - 1510899 | 12786.2 |
| peptide/nickel transport system permease protein | CLV71_102444 | Not Available | Negative | 1510909 - 1511790 | 31249.9 |
| peptide/nickel transport system permease protein | CLV71_102445 | Not Available | Negative | 1511790 - 1512707 | 32937.9 |
| peptide/nickel transport system substrate-binding protein | CLV71_102446 | Not Available | Negative | 1512712 - 1514310 | 58640.2 |
| isocitrate dehydrogenase (nad+) | CLV71_102447 | Not Available | Positive | 1514398 - 1515405 | 34852.6 |
| 5,10-methylenetetrahydromethanopterin reductase | CLV71_102448 | Not Available | Positive | 1515495 - 1516529 | 37092.4 |
| hypothetical protein | CLV71_102449 | Not Available | Positive | 1516536 - 1516706 | 5946.43 |
| l-seryl-trna(sec) selenium transferase | CLV71_102450 | Not Available | Negative | 1516943 - 1518208 | 42626.4 |
| 3-hydroxyisobutyrate dehydrogenase | CLV71_102451 | Not Available | Negative | 1518263 - 1519153 | 30983.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
