Actinophytocola oryzae strain DSM 45499

aerobic

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Pseudonocardiales

Family

Pseudonocardiaceae

Genus

Actinophytocola

Description

Actinophytocola oryzae strain DSM 45499 is a Gram-positive, aerobic bacterium characterized by its non-motile nature. This strain is classified as mesophilic, with an optimal growth temperature of 25°C, indicating that it thrives in moderate temperature ranges typical of many environments. Notably, Actinophytocola oryzae is spore-forming, which suggests an adaptation for survival in fluctuating environmental conditions, allowing it to endure stressors that may be detrimental to other microbial species. The organism possesses a single replicon, which is indicative of its genetic structure and may play a role in its reproductive and metabolic processes. The accession number for this strain is SOCP00000000.1, which serves as a reference for its genetic data. In ecological contexts, the ability of Actinophytocola oryzae to form spores may enhance its role in nutrient cycling within its habitat, potentially contributing to soil health and plant growth. As a member of the microbial community, it could interact with other microorganisms and plants, influencing various biological processes. The strain's aerobic requirements also suggest its involvement in aerobic metabolic pathways, which are crucial for the breakdown of organic matter in aerobic environments. Overall, Actinophytocola oryzae strain DSM 45499 exemplifies the complex interactions that microorganisms have within their ecosystems, particularly in relation to their survival strategies and ecological contributions.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderPseudonocardiales
FamilyPseudonocardiaceae
GenusActinophytocola
SpeciesActinophytocola oryzae
Strainstrain DSM 45499

Profile

Physiology
Gram staining propertiesGram-positive
ShapeNot Available
Mobilitynon-motile
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsaerobic
Optimal temperature25
Temperature rangemesophilic
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
Sporulationspore-forming
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Actinophytocola oryzae strain DSM 45499 Ga0181036_152, whole

Gene Summary

Adenine Count

1575419 bp

Thymine Count

1584210 bp

Guanine Count

3779002 bp

Cytosine Count

3767380 bp

Genome Length

10706011 bp

Protein-coding Genes

9418 genes

Non-Coding Genes

112 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
had superfamily hydrolase (tigr01493 family)/had superfamily hydrolase (tigr01509 family)/had superfamily hydrolase (tigr01549 family)CLV71_102372Not AvailablePositive1437193 - 143789124298.9
threonine dehydrogenase-like zn-dependent dehydrogenaseCLV71_102373Not AvailableNegative1437893 - 143888834260.9
4-aminobutyrate aminotransferaseCLV71_102374Not AvailableNegative1438885 - 144015045457.4
trehalose 6-phosphate synthaseCLV71_102375Not AvailableNegative1440143 - 144158853337.1
dtdp-4-dehydrorhamnose reductaseCLV71_102376Not AvailableNegative1441585 - 144249331905.8
fucose permeaseCLV71_102377Not AvailableNegative1442548 - 144373839955.4
n-acetylglucosamine kinase-like badf-type atpaseCLV71_102378Not AvailablePositive1443883 - 144484231880.0
sugar phosphate isomerase/epimeraseCLV71_102379Not AvailablePositive1444839 - 144580733909.3
glucose-1-phosphate adenylyltransferaseCLV71_102380Not AvailablePositive1445804 - 144690139106.0
3-dehydroquinate synthaseCLV71_102381Not AvailableNegative1446917 - 144808041894.5

Displaying genes 1251 – 1260 of 9530 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.