Stenotrophomonas sp. CC22-02

Rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Lysobacterales

Family

Lysobacteraceae

Genus

Stenotrophomonas

Description

Stenotrophomonas sp. CC22-02 is a rod-shaped bacterium characterized by the presence of flagella, which suggests motility capabilities. This organism possesses a single replicon, indicating that it has a streamlined genomic structure, potentially allowing for efficient replication and adaptation in its environment. The accession number for this strain is SOCO00000000.1, which provides a reference for genomic data and further research. The morphology and motility of Stenotrophomonas sp. CC22-02 may confer advantages in various ecological niches, allowing it to navigate through different substrates and environments. Stenotrophomonas species are known for their versatility and ability to thrive in diverse conditions, often found in soil, water, and as opportunistic pathogens in clinical settings. The presence of flagella is a notable trait, as it can influence the organism's ability to colonize surfaces and compete with other microorganisms. This motility can be critical in biofilm formation, which is a common trait among bacteria in natural and engineered environments. The ecological implications of Stenotrophomonas sp. CC22-02's motility and adaptability underscore its potential role in biogeochemical cycles and interactions within microbial communities. Further exploration of its traits and behaviors could provide insights into its ecological significance and potential applications in biotechnology or medicine.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderLysobacterales
FamilyLysobacteraceae
GenusStenotrophomonas
SpeciesStenotrophomonas sp. CC22-02
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Stenotrophomonas sp. CC22-02 N440DRAFT_scaffold00007.7, whole

Gene Summary

Adenine Count

738193 bp

Thymine Count

742280 bp

Guanine Count

1494125 bp

Cytosine Count

1494551 bp

Genome Length

4472669 bp

Protein-coding Genes

3907 genes

Non-Coding Genes

130 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
l,d-peptidoglycan transpeptidase ykud (erfk/ybis/ycfs/ynhg family)N440_3981Not AvailableNegative4356248 - 435700927337.7
rpir family transcriptional regulatorN440_3982Not AvailableNegative4357025 - 435787331191.5
o-succinylbenzoate synthaseN440_3983Not AvailableNegative4358460 - 435955438814.3
cell wall-associated nlpc family hydrolaseN440_3984Not AvailableNegative4359555 - 436099152513.7
transglutaminase-like putative cysteine proteaseN440_3985Not AvailablePositive4361124 - 436261455183.2
tonb-dependent receptor-like proteinN440_3986Not AvailablePositive4362666 - 4365665109023.0
cubico group peptidase (beta-lactamase class c family)N440_3987Not AvailablePositive4365653 - 436723958518.0
d-alanyl-d-alanine dipeptidaseN440_3988Not AvailablePositive4367172 - 436788526075.9
hypothetical proteinN440_3989Not AvailablePositive4367953 - 436832413466.8
ef hand domain-containing proteinN440_3990Not AvailablePositive4368557 - 436896713412.3

Displaying genes 3941 – 3950 of 4037 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.