Stenotrophomonas sp. CC22-02

Rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Lysobacterales

Family

Lysobacteraceae

Genus

Stenotrophomonas

Description

Stenotrophomonas sp. CC22-02 is a rod-shaped bacterium characterized by the presence of flagella, which suggests motility capabilities. This organism possesses a single replicon, indicating that it has a streamlined genomic structure, potentially allowing for efficient replication and adaptation in its environment. The accession number for this strain is SOCO00000000.1, which provides a reference for genomic data and further research. The morphology and motility of Stenotrophomonas sp. CC22-02 may confer advantages in various ecological niches, allowing it to navigate through different substrates and environments. Stenotrophomonas species are known for their versatility and ability to thrive in diverse conditions, often found in soil, water, and as opportunistic pathogens in clinical settings. The presence of flagella is a notable trait, as it can influence the organism's ability to colonize surfaces and compete with other microorganisms. This motility can be critical in biofilm formation, which is a common trait among bacteria in natural and engineered environments. The ecological implications of Stenotrophomonas sp. CC22-02's motility and adaptability underscore its potential role in biogeochemical cycles and interactions within microbial communities. Further exploration of its traits and behaviors could provide insights into its ecological significance and potential applications in biotechnology or medicine.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderLysobacterales
FamilyLysobacteraceae
GenusStenotrophomonas
SpeciesStenotrophomonas sp. CC22-02
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Stenotrophomonas sp. CC22-02 N440DRAFT_scaffold00007.7, whole

Gene Summary

Adenine Count

738193 bp

Thymine Count

742280 bp

Guanine Count

1494125 bp

Cytosine Count

1494551 bp

Genome Length

4472669 bp

Protein-coding Genes

3907 genes

Non-Coding Genes

130 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
pilus assembly protein fimvN440_2444Not AvailableNegative2625120 - 262711769148.0
aspartate-semialdehyde dehydrogenaseN440_2445Not AvailableNegative2627268 - 262829636943.7
gluconate 2-dehydrogenaseN440_2446Not AvailableNegative2628389 - 262942636135.6
chorismate synthaseN440_2447Not AvailableNegative2629419 - 263052238775.9
[lsu ribosomal protein l3p]-glutamine n5-methyltransferaseN440_2448Not AvailableNegative2630519 - 263144834511.0
protein sco1/2N440_2449Not AvailablePositive2631571 - 263222123333.9
phosphatidylserine decarboxylaseN440_2450Not AvailablePositive2632218 - 263306030778.8
Ncrna_class:antisense_rnaNot AvailableNot AvailablePositive2633056 - 2633133Not Available
regulator of ribonuclease activity bN440_2452Not AvailableNegative2633132 - 263347913060.0
membrane-bound lytic murein transglycosylase dN440_2453Not AvailableNegative2633503 - 263511057428.4

Displaying genes 2421 – 2430 of 4037 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.