Halospina denitrificans strain DSM 15505

rodfacultative aerobe/anaerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Oceanospirillales

Family

Halomonadaceae

Genus

Halospina

Description

Halospina denitrificans strain DSM 15505 is a Gram-negative, non-motile, rod-shaped bacterium. It exhibits facultative aerobic and anaerobic growth, indicating its ability to thrive in varying oxygen conditions. This adaptability allows it to occupy diverse ecological niches, potentially contributing to its survival in environments where oxygen levels fluctuate. The strain has a single replicon, which is characteristic of certain bacterial species and may reflect its genomic organization and replication strategy. Halospina denitrificans is also classified as non-spore-forming, suggesting that it does not produce spores as a means of survival under adverse conditions. The accession number for this strain is SOAX00000000.1, which can be used for further reference in genetic and genomic studies. The traits of Halospina denitrificans suggest its role in biogeochemical processes, particularly in nitrogen cycling, due to its denitrifying capabilities. Denitrification is a critical ecological process that reduces nitrate to nitrogen gas, thereby influencing nutrient availability and ecosystem dynamics. Understanding the characteristics of Halospina denitrificans can provide insights into its ecological functions and contributions to microbial communities in various environments.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderOceanospirillales
FamilyHalomonadaceae
GenusHalospina
SpeciesHalospina denitrificans
Strainstrain DSM 15505

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
Mobilitynon-motile
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsfacultative aerobe/anaerobe
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
Sporulationnon-spore-forming
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Halospina denitrificans strain DSM 15505 Ga0244530_116, whole

Gene Summary

Adenine Count

667238 bp

Thymine Count

655615 bp

Guanine Count

988824 bp

Cytosine Count

1005978 bp

Genome Length

3318232 bp

Protein-coding Genes

3014 genes

Non-Coding Genes

50 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
cytoskeletal protein ccma (bactofilin family)DES49_0728Not AvailablePositive769676 - 77020018314.1
iron-sulfur cluster insertion proteinDES49_0729Not AvailablePositive770265 - 77061812654.6
anhydro-n-acetylmuramic acid kinaseDES49_0730Not AvailableNegative770604 - 77174640262.4
murein dd-endopeptidase mepm/ murein hydrolase activator nlpdDES49_0731Not AvailableNegative771747 - 77309949558.2
tyrosyl-trna synthetaseDES49_0732Not AvailablePositive773413 - 77461244729.4
nadph:quinone reductase-like zn-dependent oxidoreductaseDES49_0733Not AvailableNegative775238 - 77624535580.4
degv family protein with edd domainDES49_0734Not AvailablePositive776502 - 77745535438.2
hypothetical proteinDES49_0735Not AvailableNegative777462 - 77819926593.9
nadh dehydrogenase fad-containing subunitDES49_0736Not AvailablePositive778309 - 77960747775.9
glutathione s-transferaseDES49_0737Not AvailableNegative779750 - 78085342626.5

Displaying genes 721 – 730 of 3064 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.