Halospina denitrificans strain DSM 15505

rodfacultative aerobe/anaerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Oceanospirillales

Family

Halomonadaceae

Genus

Halospina

Description

Halospina denitrificans strain DSM 15505 is a Gram-negative, non-motile, rod-shaped bacterium. It exhibits facultative aerobic and anaerobic growth, indicating its ability to thrive in varying oxygen conditions. This adaptability allows it to occupy diverse ecological niches, potentially contributing to its survival in environments where oxygen levels fluctuate. The strain has a single replicon, which is characteristic of certain bacterial species and may reflect its genomic organization and replication strategy. Halospina denitrificans is also classified as non-spore-forming, suggesting that it does not produce spores as a means of survival under adverse conditions. The accession number for this strain is SOAX00000000.1, which can be used for further reference in genetic and genomic studies. The traits of Halospina denitrificans suggest its role in biogeochemical processes, particularly in nitrogen cycling, due to its denitrifying capabilities. Denitrification is a critical ecological process that reduces nitrate to nitrogen gas, thereby influencing nutrient availability and ecosystem dynamics. Understanding the characteristics of Halospina denitrificans can provide insights into its ecological functions and contributions to microbial communities in various environments.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderOceanospirillales
FamilyHalomonadaceae
GenusHalospina
SpeciesHalospina denitrificans
Strainstrain DSM 15505

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
Mobilitynon-motile
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsfacultative aerobe/anaerobe
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
Sporulationnon-spore-forming
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Halospina denitrificans strain DSM 15505 Ga0244530_116, whole

Gene Summary

Adenine Count

667238 bp

Thymine Count

655615 bp

Guanine Count

988824 bp

Cytosine Count

1005978 bp

Genome Length

3318232 bp

Protein-coding Genes

3014 genes

Non-Coding Genes

50 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
50s ribosomal protein l16 3-hydroxylaseDES49_2343Not AvailableNegative2483053 - 248423744071.4
adenylosuccinate lyaseDES49_2344Not AvailableNegative2484405 - 248579652052.7
high frequency lysogenization proteinDES49_2345Not AvailableNegative2485866 - 248649223708.6
trna (5-methylaminomethyl-2-thiouridylate)-methyltransferaseDES49_2346Not AvailableNegative2486505 - 248765942421.0
nudix domain-containing proteinDES49_2347Not AvailableNegative2487918 - 248835816510.7
isocitrate dehydrogenase (nadp)DES49_2348Not AvailablePositive2488503 - 248976245964.0
putative cold-shock dna-binding proteinDES49_2349Not AvailableNegative2489909 - 249023512205.1
atp-dependent clp protease adaptor protein clpsDES49_2350Not AvailablePositive2490445 - 249087616326.5
atp-dependent clp protease atp-binding subunit clpaDES49_2351Not AvailablePositive2490836 - 249317286532.6
translation initiation factor 1 (bif-1)DES49_2352Not AvailableNegative2493240 - 24934588259.09

Displaying genes 2311 – 2320 of 3064 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.