Halospina denitrificans strain DSM 15505

rodfacultative aerobe/anaerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Oceanospirillales

Family

Halomonadaceae

Genus

Halospina

Description

Halospina denitrificans strain DSM 15505 is a Gram-negative, non-motile, rod-shaped bacterium. It exhibits facultative aerobic and anaerobic growth, indicating its ability to thrive in varying oxygen conditions. This adaptability allows it to occupy diverse ecological niches, potentially contributing to its survival in environments where oxygen levels fluctuate. The strain has a single replicon, which is characteristic of certain bacterial species and may reflect its genomic organization and replication strategy. Halospina denitrificans is also classified as non-spore-forming, suggesting that it does not produce spores as a means of survival under adverse conditions. The accession number for this strain is SOAX00000000.1, which can be used for further reference in genetic and genomic studies. The traits of Halospina denitrificans suggest its role in biogeochemical processes, particularly in nitrogen cycling, due to its denitrifying capabilities. Denitrification is a critical ecological process that reduces nitrate to nitrogen gas, thereby influencing nutrient availability and ecosystem dynamics. Understanding the characteristics of Halospina denitrificans can provide insights into its ecological functions and contributions to microbial communities in various environments.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderOceanospirillales
FamilyHalomonadaceae
GenusHalospina
SpeciesHalospina denitrificans
Strainstrain DSM 15505

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
Mobilitynon-motile
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsfacultative aerobe/anaerobe
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
Sporulationnon-spore-forming
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Halospina denitrificans strain DSM 15505 Ga0244530_116, whole

Gene Summary

Adenine Count

667238 bp

Thymine Count

655615 bp

Guanine Count

988824 bp

Cytosine Count

1005978 bp

Genome Length

3318232 bp

Protein-coding Genes

3014 genes

Non-Coding Genes

50 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
hypothetical proteinDES49_1877Not AvailablePositive2009859 - 20099603618.76
pimeloyl-acp methyl ester carboxylesteraseDES49_1879Not AvailablePositive2010415 - 201128431618.8
diguanylate cyclase (ggdef)-like proteinDES49_1880Not AvailableNegative2011294 - 201324373512.6
hypothetical proteinDES49_1881Not AvailableNegative2013473 - 201402119432.5
sodium/proton antiporter (cpa1 family)DES49_1882Not AvailableNegative2014216 - 201549946467.1
putative amino acid dehydrogenaseDES49_1883Not AvailablePositive2015812 - 201714050372.8
eal domain-containing protein (putative c-di-gmp-specific phosphodiesterase class i)DES49_1884Not AvailablePositive2017162 - 201971494987.1
pas domain s-box-containing protein/diguanylate cyclase (ggdef)-like proteinDES49_1885Not AvailablePositive2019881 - 202199579039.7
uncharacterized membrane protein yqae (upf0057 family)DES49_1886Not AvailableNegative2022047 - 20222206276.2
malate dehydrogenase (quinone)DES49_1888Not AvailableNegative2022699 - 202413853372.7

Displaying genes 1851 – 1860 of 3064 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.