Halospina denitrificans strain DSM 15505

rodfacultative aerobe/anaerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Oceanospirillales

Family

Halomonadaceae

Genus

Halospina

Description

Halospina denitrificans strain DSM 15505 is a Gram-negative, non-motile, rod-shaped bacterium. It exhibits facultative aerobic and anaerobic growth, indicating its ability to thrive in varying oxygen conditions. This adaptability allows it to occupy diverse ecological niches, potentially contributing to its survival in environments where oxygen levels fluctuate. The strain has a single replicon, which is characteristic of certain bacterial species and may reflect its genomic organization and replication strategy. Halospina denitrificans is also classified as non-spore-forming, suggesting that it does not produce spores as a means of survival under adverse conditions. The accession number for this strain is SOAX00000000.1, which can be used for further reference in genetic and genomic studies. The traits of Halospina denitrificans suggest its role in biogeochemical processes, particularly in nitrogen cycling, due to its denitrifying capabilities. Denitrification is a critical ecological process that reduces nitrate to nitrogen gas, thereby influencing nutrient availability and ecosystem dynamics. Understanding the characteristics of Halospina denitrificans can provide insights into its ecological functions and contributions to microbial communities in various environments.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderOceanospirillales
FamilyHalomonadaceae
GenusHalospina
SpeciesHalospina denitrificans
Strainstrain DSM 15505

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
Mobilitynon-motile
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsfacultative aerobe/anaerobe
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
Sporulationnon-spore-forming
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Halospina denitrificans strain DSM 15505 Ga0244530_116, whole

Gene Summary

Adenine Count

667238 bp

Thymine Count

655615 bp

Guanine Count

988824 bp

Cytosine Count

1005978 bp

Genome Length

3318232 bp

Protein-coding Genes

3014 genes

Non-Coding Genes

50 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
tryptophan synthase beta chainDES49_1635Not AvailableNegative1742080 - 174329744509.7
phosphoribosylanthranilate isomeraseDES49_1636Not AvailableNegative1743284 - 174391622443.7
trna pseudouridine(38-40) synthaseDES49_1637Not AvailableNegative1743976 - 174481830421.2
pilus assembly protein fimvDES49_1638Not AvailableNegative1744825 - 1748058114171.0
aspartate semialdehyde dehydrogenaseDES49_1639Not AvailableNegative1748262 - 174938040414.6
3-isopropylmalate dehydrogenaseDES49_1640Not AvailableNegative1749423 - 175050839065.9
3-isopropylmalate/(r)-2-methylmalate dehydratase small subunitDES49_1641Not AvailableNegative1750542 - 175118624008.2
3-isopropylmalate/(r)-2-methylmalate dehydratase large subunitDES49_1642Not AvailableNegative1751191 - 175261851135.9
dna-binding transcriptional lysr family regulatorDES49_1643Not AvailablePositive1752901 - 175377932820.3
ppp family 3-phenylpropionic acid transporterDES49_1644Not AvailableNegative1753776 - 175495743602.2

Displaying genes 1611 – 1620 of 3064 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.