Comamonas sp. JUb58

Rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Betaproteobacteria

Order

Burkholderiales

Family

Comamonadaceae

Genus

Comamonas

Description

Comamonas sp. JUb58 is characterized as a rod-shaped bacterium with the presence of flagella, indicating its motility. This species is notable for having a single replicon, which can be significant in understanding its genetic organization and replication processes. The accession number for Comamonas sp. JUb58 is SOAL00000000.1, which serves as a reference for its genomic data. The presence of flagella suggests that Comamonas sp. JUb58 may have adaptations that facilitate its movement in various aquatic or moist environments, which is typical for many members of the Comamonadaceae family. This motility can enhance its ability to access nutrients and respond to environmental changes. Furthermore, as a member of the Comamonas genus, this species may play a role in biogeochemical cycles, particularly in the degradation of complex organic compounds. Understanding the specific ecological roles of Comamonas sp. JUb58 could provide insights into its potential applications in bioremediation or wastewater treatment, as numerous Comamonas species have been studied for their ability to degrade pollutants. Overall, the motility and genetic characteristics of Comamonas sp. JUb58 position it as a significant organism within its ecological niche, with potential implications for environmental microbiology and biotechnology.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassBetaproteobacteria
OrderBurkholderiales
FamilyComamonadaceae
GenusComamonas
SpeciesComamonas sp. JUb58
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Comamonas sp. JUb58 Ga0304811_160, whole genome shotgun sequence.

Gene Summary

Adenine Count

1007356 bp

Thymine Count

1007686 bp

Guanine Count

1722521 bp

Cytosine Count

1719421 bp

Genome Length

5457177 bp

Protein-coding Genes

0 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
short-subunit dehydrogenaseEDF71_10248Not AvailableNegative561553 - 56226024586.3
tetr family transcriptional regulatorEDF71_10249Not AvailableNegative562549 - 56317221809.8
lysr family transcriptional regulatorEDF71_10250Not AvailableNegative563251 - 56411731087.0
agmatine deiminaseEDF71_10251Not AvailablePositive564268 - 56541941054.8
putative enzyme related to lactoylglutathione lyaseEDF71_10252Not AvailableNegative565442 - 56583714146.9
carbohydrate abc transporter membrane protein 2 (cut1 family)EDF71_10253Not AvailableNegative565886 - 56671931285.6
carbohydrate abc transporter membrane protein 1 (cut1 family)EDF71_10254Not AvailableNegative566716 - 56761533187.7
carbohydrate abc transporter substrate-binding protein (cut1 family)EDF71_10255Not AvailableNegative567700 - 56899846872.7
carbohydrate abc transporter atp-binding protein (cut1 family)EDF71_10256Not AvailableNegative569077 - 57010236171.9
duf2905 family proteinEDF71_10257Not AvailableNegative570254 - 5704487144.31

Displaying genes 691 – 700 of 4986 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.