Comamonas sp. JUb58

Rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Betaproteobacteria

Order

Burkholderiales

Family

Comamonadaceae

Genus

Comamonas

Description

Comamonas sp. JUb58 is characterized as a rod-shaped bacterium with the presence of flagella, indicating its motility. This species is notable for having a single replicon, which can be significant in understanding its genetic organization and replication processes. The accession number for Comamonas sp. JUb58 is SOAL00000000.1, which serves as a reference for its genomic data. The presence of flagella suggests that Comamonas sp. JUb58 may have adaptations that facilitate its movement in various aquatic or moist environments, which is typical for many members of the Comamonadaceae family. This motility can enhance its ability to access nutrients and respond to environmental changes. Furthermore, as a member of the Comamonas genus, this species may play a role in biogeochemical cycles, particularly in the degradation of complex organic compounds. Understanding the specific ecological roles of Comamonas sp. JUb58 could provide insights into its potential applications in bioremediation or wastewater treatment, as numerous Comamonas species have been studied for their ability to degrade pollutants. Overall, the motility and genetic characteristics of Comamonas sp. JUb58 position it as a significant organism within its ecological niche, with potential implications for environmental microbiology and biotechnology.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassBetaproteobacteria
OrderBurkholderiales
FamilyComamonadaceae
GenusComamonas
SpeciesComamonas sp. JUb58
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Comamonas sp. JUb58 Ga0304811_160, whole genome shotgun sequence.

Gene Summary

Adenine Count

1007356 bp

Thymine Count

1007686 bp

Guanine Count

1722521 bp

Cytosine Count

1719421 bp

Genome Length

5457177 bp

Protein-coding Genes

0 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
peptide chain release factor 1 (brf-1)EDF71_1264Not AvailableNegative4884271 - 488535640513.9
glutamyl-trna reductaseEDF71_1265Not AvailableNegative4885474 - 488679047366.0
hypothetical proteinEDF71_1266Not AvailablePositive4886870 - 488714810168.8
hypothetical proteinEDF71_1267Not AvailablePositive4887218 - 488865752258.1
tripartite-type tricarboxylate transporter receptor subunit tctcEDF71_1268Not AvailablePositive4888795 - 488976933991.4
glycerophosphoryl diester phosphodiesteraseEDF71_1269Not AvailableNegative4889847 - 489062027801.2
carbohydrate abc transporter atp-binding protein (cut1 family)EDF71_12610Not AvailableNegative4890736 - 489174336895.9
carbohydrate abc transporter membrane protein 2 (cut1 family)EDF71_12611Not AvailableNegative4891798 - 489264631457.5
carbohydrate abc transporter membrane protein 1 (cut1 family)EDF71_12612Not AvailableNegative4892649 - 489353032826.8
carbohydrate abc transporter substrate-binding protein (cut1 family)EDF71_12613Not AvailableNegative4893641 - 489495747879.7

Displaying genes 4471 – 4480 of 4986 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.