Comamonas sp. JUb58

Rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Betaproteobacteria

Order

Burkholderiales

Family

Comamonadaceae

Genus

Comamonas

Description

Comamonas sp. JUb58 is characterized as a rod-shaped bacterium with the presence of flagella, indicating its motility. This species is notable for having a single replicon, which can be significant in understanding its genetic organization and replication processes. The accession number for Comamonas sp. JUb58 is SOAL00000000.1, which serves as a reference for its genomic data. The presence of flagella suggests that Comamonas sp. JUb58 may have adaptations that facilitate its movement in various aquatic or moist environments, which is typical for many members of the Comamonadaceae family. This motility can enhance its ability to access nutrients and respond to environmental changes. Furthermore, as a member of the Comamonas genus, this species may play a role in biogeochemical cycles, particularly in the degradation of complex organic compounds. Understanding the specific ecological roles of Comamonas sp. JUb58 could provide insights into its potential applications in bioremediation or wastewater treatment, as numerous Comamonas species have been studied for their ability to degrade pollutants. Overall, the motility and genetic characteristics of Comamonas sp. JUb58 position it as a significant organism within its ecological niche, with potential implications for environmental microbiology and biotechnology.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassBetaproteobacteria
OrderBurkholderiales
FamilyComamonadaceae
GenusComamonas
SpeciesComamonas sp. JUb58
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Comamonas sp. JUb58 Ga0304811_160, whole genome shotgun sequence.

Gene Summary

Adenine Count

1007356 bp

Thymine Count

1007686 bp

Guanine Count

1722521 bp

Cytosine Count

1719421 bp

Genome Length

5457177 bp

Protein-coding Genes

0 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
tripartite atp-independent transporter dctm subunitEDF71_11847Not AvailablePositive4100068 - 410188864572.9
trap-type mannitol/chloroaromatic compound transport system substrate-binding proteinEDF71_11848Not AvailableNegative4102120 - 410320539666.7
1-deoxy-d-xylulose-5-phosphate synthaseEDF71_11849Not AvailableNegative4103472 - 410538568397.3
farnesyl diphosphate synthaseEDF71_11850Not AvailableNegative4105511 - 410641931516.9
exodeoxyribonuclease vii small subunitEDF71_11851Not AvailableNegative4106429 - 41066869229.96
choline monooxygenaseEDF71_11852Not AvailablePositive4107083 - 410822243138.9
hypothetical proteinEDF71_11853Not AvailablePositive4108477 - 410935831700.8
thiosulfate/3-mercaptopyruvate sulfurtransferaseEDF71_11854Not AvailablePositive4109459 - 411037932515.3
trypsin-like peptidaseEDF71_11855Not AvailableNegative4110446 - 411239569686.8
small multidrug resistance pumpEDF71_11856Not AvailableNegative4112514 - 411284611363.3

Displaying genes 3811 – 3820 of 4986 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.