Comamonas sp. JUb58

Rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Betaproteobacteria

Order

Burkholderiales

Family

Comamonadaceae

Genus

Comamonas

Description

Comamonas sp. JUb58 is characterized as a rod-shaped bacterium with the presence of flagella, indicating its motility. This species is notable for having a single replicon, which can be significant in understanding its genetic organization and replication processes. The accession number for Comamonas sp. JUb58 is SOAL00000000.1, which serves as a reference for its genomic data. The presence of flagella suggests that Comamonas sp. JUb58 may have adaptations that facilitate its movement in various aquatic or moist environments, which is typical for many members of the Comamonadaceae family. This motility can enhance its ability to access nutrients and respond to environmental changes. Furthermore, as a member of the Comamonas genus, this species may play a role in biogeochemical cycles, particularly in the degradation of complex organic compounds. Understanding the specific ecological roles of Comamonas sp. JUb58 could provide insights into its potential applications in bioremediation or wastewater treatment, as numerous Comamonas species have been studied for their ability to degrade pollutants. Overall, the motility and genetic characteristics of Comamonas sp. JUb58 position it as a significant organism within its ecological niche, with potential implications for environmental microbiology and biotechnology.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassBetaproteobacteria
OrderBurkholderiales
FamilyComamonadaceae
GenusComamonas
SpeciesComamonas sp. JUb58
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Comamonas sp. JUb58 Ga0304811_160, whole genome shotgun sequence.

Gene Summary

Adenine Count

1007356 bp

Thymine Count

1007686 bp

Guanine Count

1722521 bp

Cytosine Count

1719421 bp

Genome Length

5457177 bp

Protein-coding Genes

0 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
type vi secretion system secreted protein vgrgEDF71_109163Not AvailableNegative2596371 - 259871086892.1
amino acid/amide abc transporter substrate-binding protein (haat family)EDF71_109164Not AvailablePositive2599085 - 260029944284.0
amino acid/amide abc transporter membrane protein 1 (haat family) /amino acid/amide abc transporter membrane protein 2 (haat family)EDF71_109165Not AvailablePositive2600411 - 260231266619.3
hypothetical proteinEDF71_109166Not AvailableNegative2602362 - 260271211597.7
50s ribosome-binding gtpaseEDF71_109167Not AvailableNegative2602857 - 260446158103.4
uncharacterized protein duf2868EDF71_109168Not AvailableNegative2604475 - 260600455716.4
tryptophan synthase beta chainEDF71_109169Not AvailablePositive2606108 - 260731643123.8
dna-binding transcriptional lysr family regulatorEDF71_109170Not AvailablePositive2607510 - 260852635782.3
cation diffusion facilitator czcd-associated flavoprotein czcoEDF71_109171Not AvailablePositive2608523 - 261001054096.0
peptide/nickel transport system permease proteinEDF71_109172Not AvailablePositive2610007 - 261098135118.4

Displaying genes 2511 – 2520 of 4986 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.