Halanaerobium congolense strain UTICA-S4D12

anaerobic

Kingdom

Bacillati

Phylum

Bacillota

Class

Clostridia

Order

Halanaerobiales

Family

Halanaerobiaceae

Genus

Halanaerobium

Description

Halanaerobium congolense strain UTICA-S4D12 is an anaerobic bacterium isolated from a produced water sample associated with the Utica shale, specifically from hydraulically fractured shale wells and oil reservoirs. This strain thrives in deep subsurface shale environments where oxygen levels are minimal or absent, making it well-adapted to the anaerobic conditions typical of these habitats. A notable characteristic of Halanaerobium congolense UTICA-S4D12 is the presence of flagella, which may facilitate motility within its environment, potentially aiding in nutrient acquisition and colonization of specific niches within the shale. Additionally, the strain possesses a single replicon, indicating a streamlined genetic organization that might contribute to its adaptability and survival in complex subsurface ecosystems. The genomic sequence of Halanaerobium congolense UTICA-S4D12 is cataloged under the accession number SOAA00000000.1, providing a basis for further studies on its metabolic pathways and ecological roles. This bacterium's presence in produced water samples highlights its potential importance in biogeochemical cycles within oil reservoirs and suggests that it may play a role in the degradation of organic compounds in anaerobic environments. Overall, Halanaerobium congolense strain UTICA-S4D12 exemplifies the diversity and adaptability of microbial life in extreme environments, particularly in relation to human activities such as hydraulic fracturing, which can alter subsurface ecosystems.

Taxonomy

KingdomBacillati
PhylumBacillota
ClassClostridia
OrderHalanaerobiales
FamilyHalanaerobiaceae
GenusHalanaerobium
SpeciesHalanaerobium congolense
Strainstrain UTICA-S4D12

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsanaerobic
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatDeep subsurface shale; hydraulically fractured shale wells; hydraulically fractured wells; oil reservoir; produced water sample from the Utica shale; Utica-Point Pleasant natural gas well
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Halanaerobium congolense strain UTICA-S4D12 Ga0139032_194, whole

Gene Summary

Adenine Count

915238 bp

Thymine Count

938020 bp

Guanine Count

440291 bp

Cytosine Count

473943 bp

Genome Length

2768198 bp

Protein-coding Genes

2637 genes

Non-Coding Genes

60 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
acetyldiaminopimelate aminotransferaseBY453_1249Not AvailableNegative2152816 - 215393741517.1
2,3,4,5-tetrahydropyridine-2,6-dicarboxylate n-acetyltransferaseBY453_12410Not AvailableNegative2154086 - 215478424679.5
dihydrodipicolinate reductaseBY453_12411Not AvailableNegative2154869 - 215551624354.1
4-hydroxy-tetrahydrodipicolinate synthaseBY453_12412Not AvailableNegative2155513 - 215639132250.2
diaminopimelate decarboxylaseBY453_12413Not AvailableNegative2156393 - 215762546472.2
glutamate dehydrogenase (nadp+)BY453_12415Not AvailablePositive2158216 - 215955649044.4
glycine betaine/proline transport system permease proteinBY453_12416Not AvailableNegative2159698 - 216054630488.7
glycine betaine/proline transport system substrate-binding proteinBY453_12417Not AvailableNegative2160654 - 216159235286.7
glycine betaine/proline transport system atp-binding proteinBY453_12418Not AvailableNegative2161658 - 216283644029.3
atp-dependent rna helicase deadBY453_12419Not AvailablePositive2163326 - 216491859560.5

Displaying genes 2091 – 2100 of 2697 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.