Sphingobacterium yanglingense strain DSM 28353

Rod

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Sphingobacteriia

Order

Sphingobacteriales

Family

Sphingobacteriaceae

Genus

Sphingobacterium

Description

Sphingobacterium yanglingense strain DSM 28353 is characterized as a rod-shaped bacterium. This specific strain has been assigned the accession number SNYV00000000.1, which provides a reference for its genomic data. Additionally, it is noted that Sphingobacterium yanglingense possesses a single replicon. The genus Sphingobacterium is known for its environmental resilience and capacity to degrade complex organic materials, often found in diverse habitats, including soil and aquatic environments. The rod shape of this bacterium may contribute to its motility and ability to colonize various ecological niches, facilitating its role in nutrient cycling and organic matter decomposition. Overall, the characteristics of Sphingobacterium yanglingense strain DSM 28353 highlight its potential ecological significance, particularly in bioremediation processes and soil health. Its single replicon structure may also reflect a streamlined genomic organization, which can be advantageous for adaptation and survival in fluctuating environmental conditions.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassSphingobacteriia
OrderSphingobacteriales
FamilySphingobacteriaceae
GenusSphingobacterium
SpeciesSphingobacterium yanglingense
Strainstrain DSM 28353

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Sphingobacterium yanglingense strain DSM 28353
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Sphingobacterium yanglingense strain DSM 28353 Ga0180993_109,

Gene Summary

Adenine Count

Not Available

Thymine Count

Not Available

Guanine Count

Not Available

Cytosine Count

Not Available

Genome Length

Not Available

Protein-coding Genes

4132 genes

Non-Coding Genes

563 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
thioredoxin-related proteinCLV99_4691Not AvailablePositive5390356 - 539157647223.6
thiol-disulfide isomerase/thioredoxinCLV99_4692Not AvailablePositive5391611 - 539295450295.0
methyltransferase family proteinCLV99_4693Not AvailableNegative5393011 - 539360722708.0
hypothetical proteinCLV99_4694Not AvailablePositive5393758 - 539411413270.4
peroxiredoxinCLV99_4695Not AvailablePositive5394332 - 539481118027.0
hypothetical proteinCLV99_4696Not AvailablePositive5394819 - 53949535330.71
copper chaperone copzCLV99_4697Not AvailablePositive5394950 - 539545918328.0
hypothetical proteinCLV99_4698Not AvailablePositive5395461 - 539626730152.0
rna polymerase sigma-70 factor (ecf subfamily)CLV99_4699Not AvailablePositive5396663 - 539724722298.8
fecr family proteinCLV99_4700Not AvailablePositive5397310 - 539847043695.1

Displaying genes 4621 – 4630 of 4695 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.