Sphingobacterium yanglingense strain DSM 28353

Rod

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Sphingobacteriia

Order

Sphingobacteriales

Family

Sphingobacteriaceae

Genus

Sphingobacterium

Description

Sphingobacterium yanglingense strain DSM 28353 is characterized as a rod-shaped bacterium. This specific strain has been assigned the accession number SNYV00000000.1, which provides a reference for its genomic data. Additionally, it is noted that Sphingobacterium yanglingense possesses a single replicon. The genus Sphingobacterium is known for its environmental resilience and capacity to degrade complex organic materials, often found in diverse habitats, including soil and aquatic environments. The rod shape of this bacterium may contribute to its motility and ability to colonize various ecological niches, facilitating its role in nutrient cycling and organic matter decomposition. Overall, the characteristics of Sphingobacterium yanglingense strain DSM 28353 highlight its potential ecological significance, particularly in bioremediation processes and soil health. Its single replicon structure may also reflect a streamlined genomic organization, which can be advantageous for adaptation and survival in fluctuating environmental conditions.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassSphingobacteriia
OrderSphingobacteriales
FamilySphingobacteriaceae
GenusSphingobacterium
SpeciesSphingobacterium yanglingense
Strainstrain DSM 28353

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Sphingobacterium yanglingense strain DSM 28353
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Sphingobacterium yanglingense strain DSM 28353 Ga0180993_109,

Gene Summary

Adenine Count

Not Available

Thymine Count

Not Available

Guanine Count

Not Available

Cytosine Count

Not Available

Genome Length

Not Available

Protein-coding Genes

4132 genes

Non-Coding Genes

563 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
thioredoxin 1CLV99_2719Not AvailableNegative3119306 - 311959911077.4
thioredoxin 1CLV99_2720Not AvailableNegative3119637 - 311991810923.4
protein of unknown function (duf2938)CLV99_2721Not AvailablePositive3120121 - 312060918164.8
wg repeat proteinCLV99_2722Not AvailablePositive3120750 - 312305087814.3
nodt family efflux transporter outer membrane factor (omf) lipoproteinCLV99_2723Not AvailableNegative3123084 - 312448451743.0
hydrophobe/amphiphile efflux-1 (hae1) family proteinCLV99_2724Not AvailableNegative3124499 - 3127645113734.0
membrane fusion protein (multidrug efflux system)CLV99_2725Not AvailableNegative3127669 - 312879940627.8
lyttr family two component transcriptional regulatorCLV99_2726Not AvailableNegative3128910 - 312965929224.2
histidine kinaseCLV99_2727Not AvailableNegative3129656 - 313077743033.4
putative metal-dependent hd superfamily phosphohydrolaseCLV99_2728Not AvailablePositive3131070 - 313224244674.5

Displaying genes 2661 – 2670 of 4695 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.