Sphingobacterium yanglingense strain DSM 28353

Rod

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Sphingobacteriia

Order

Sphingobacteriales

Family

Sphingobacteriaceae

Genus

Sphingobacterium

Description

Sphingobacterium yanglingense strain DSM 28353 is characterized as a rod-shaped bacterium. This specific strain has been assigned the accession number SNYV00000000.1, which provides a reference for its genomic data. Additionally, it is noted that Sphingobacterium yanglingense possesses a single replicon. The genus Sphingobacterium is known for its environmental resilience and capacity to degrade complex organic materials, often found in diverse habitats, including soil and aquatic environments. The rod shape of this bacterium may contribute to its motility and ability to colonize various ecological niches, facilitating its role in nutrient cycling and organic matter decomposition. Overall, the characteristics of Sphingobacterium yanglingense strain DSM 28353 highlight its potential ecological significance, particularly in bioremediation processes and soil health. Its single replicon structure may also reflect a streamlined genomic organization, which can be advantageous for adaptation and survival in fluctuating environmental conditions.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassSphingobacteriia
OrderSphingobacteriales
FamilySphingobacteriaceae
GenusSphingobacterium
SpeciesSphingobacterium yanglingense
Strainstrain DSM 28353

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Sphingobacterium yanglingense strain DSM 28353
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Sphingobacterium yanglingense strain DSM 28353 Ga0180993_109,

Gene Summary

Adenine Count

Not Available

Thymine Count

Not Available

Guanine Count

Not Available

Cytosine Count

Not Available

Genome Length

Not Available

Protein-coding Genes

4132 genes

Non-Coding Genes

563 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
short-subunit dehydrogenaseCLV99_1636Not AvailablePositive1867956 - 186868426659.4
hypothetical proteinCLV99_1637Not AvailablePositive1868720 - 18688966970.67
rna polymerase sigma-70 factor (family 1)CLV99_1638Not AvailablePositive1868981 - 186965826771.1
fecr family proteinCLV99_1639Not AvailablePositive1869765 - 187091643370.3
tonb-linked susc/raga family outer membrane proteinCLV99_1640Not AvailablePositive1871092 - 1874613131832.0
susd-like starch-binding protein associating with outer membraneCLV99_1641Not AvailablePositive1874622 - 187601652623.5
thiol-disulfide isomerase/thioredoxinCLV99_1642Not AvailablePositive1876071 - 187748054562.8
pap2 superfamily proteinCLV99_1643Not AvailableNegative1877710 - 187850129361.2
outer membrane receptor protein involved in fe transportCLV99_1644Not AvailableNegative1878577 - 188107594163.8
signal transduction histidine kinaseCLV99_1645Not AvailableNegative1881094 - 188238649675.5

Displaying genes 1601 – 1610 of 4695 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.