Sphingobacterium yanglingense strain DSM 28353

Rod

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Sphingobacteriia

Order

Sphingobacteriales

Family

Sphingobacteriaceae

Genus

Sphingobacterium

Description

Sphingobacterium yanglingense strain DSM 28353 is characterized as a rod-shaped bacterium. This specific strain has been assigned the accession number SNYV00000000.1, which provides a reference for its genomic data. Additionally, it is noted that Sphingobacterium yanglingense possesses a single replicon. The genus Sphingobacterium is known for its environmental resilience and capacity to degrade complex organic materials, often found in diverse habitats, including soil and aquatic environments. The rod shape of this bacterium may contribute to its motility and ability to colonize various ecological niches, facilitating its role in nutrient cycling and organic matter decomposition. Overall, the characteristics of Sphingobacterium yanglingense strain DSM 28353 highlight its potential ecological significance, particularly in bioremediation processes and soil health. Its single replicon structure may also reflect a streamlined genomic organization, which can be advantageous for adaptation and survival in fluctuating environmental conditions.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassSphingobacteriia
OrderSphingobacteriales
FamilySphingobacteriaceae
GenusSphingobacterium
SpeciesSphingobacterium yanglingense
Strainstrain DSM 28353

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Sphingobacterium yanglingense strain DSM 28353
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Sphingobacterium yanglingense strain DSM 28353 Ga0180993_109,

Gene Summary

Adenine Count

Not Available

Thymine Count

Not Available

Guanine Count

Not Available

Cytosine Count

Not Available

Genome Length

Not Available

Protein-coding Genes

4132 genes

Non-Coding Genes

563 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
3-deoxy-manno-octulosonate cytidylyltransferase (cmp-kdo synthetase)CLV99_1333Not AvailablePositive1516152 - 151689528195.6
aryl-alcohol dehydrogenase-like predicted oxidoreductaseCLV99_1334Not AvailableNegative1516920 - 151781332944.3
fkbp-type peptidyl-prolyl cis-trans isomerase fkpa/fkbp-type peptidyl-prolyl cis-trans isomerase fklbCLV99_1335Not AvailableNegative1517800 - 151857327962.8
uncharacterized protein (tigr00661 family)CLV99_1336Not AvailableNegative1518570 - 151955637111.9
zinc dependent phospholipase cCLV99_1337Not AvailablePositive1519672 - 152061036204.0
gliding motility-associated-like proteinCLV99_1338Not AvailableNegative1520621 - 152312292453.3
organic radical activating enzymeCLV99_1339Not AvailablePositive1523197 - 152382023475.0
outer membrane protein ompa-like peptidoglycan-associated proteinCLV99_1340Not AvailablePositive1523902 - 152579170024.1
putative dehydrogenaseCLV99_1341Not AvailableNegative1525788 - 152686139613.8
putative dehydrogenaseCLV99_1342Not AvailableNegative1526864 - 152813547196.1

Displaying genes 1301 – 1310 of 4695 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.