Mesocricetibacter intestinalis strain DSM 28403

microaerophile

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pasteurellales

Family

Pasteurellaceae

Genus

Mesocricetibacter

Description

Mesocricetibacter intestinalis strain DSM 28403 is a microaerophilic bacterium, indicating that it thrives in environments with reduced oxygen levels compared to atmospheric conditions. This trait is significant as it suggests the organism may have specific ecological niches where oxygen concentration is limited, influencing its metabolic processes and interactions with other microorganisms. The strain has a single replicon, which is indicative of its genetic organization. This can impact the bacterium's replication and stability, potentially influencing its adaptability and evolutionary strategies in microaerophilic environments. The accession number for Mesocricetibacter intestinalis strain DSM 28403 is SNYQ00000000.1, which provides a reference for researchers seeking to access genomic and other biological data related to this strain. This accession allows for the identification and study of its genetic material, aiding in the understanding of its biological functions and potential applications in microbiology. Overall, the microaerophilic nature and the presence of a single replicon in Mesocricetibacter intestinalis strain DSM 28403 highlight its specialized adaptations to specific ecological conditions. Understanding these traits can provide insights into its role within microbial communities, particularly in environments where oxygen is a limiting factor.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPasteurellales
FamilyPasteurellaceae
GenusMesocricetibacter
SpeciesMesocricetibacter intestinalis
Strainstrain DSM 28403

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsmicroaerophile
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Mesocricetibacter intestinalis strain DSM 28403 Ga0244706_118,

Gene Summary

Adenine Count

588122 bp

Thymine Count

594480 bp

Guanine Count

523654 bp

Cytosine Count

508410 bp

Genome Length

2214771 bp

Protein-coding Genes

1828 genes

Non-Coding Genes

53 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
d-alanyl-d-alanine carboxypeptidase/d-alanyl-d-alanine-endopeptidase (penicillin-binding protein 4)EDC45_1406Not AvailableNegative1522176 - 152360652224.9
transcription elongation factor greaEDC45_1407Not AvailablePositive1523806 - 152428217547.1
rna-binding proteinEDC45_1408Not AvailableNegative1524361 - 152466310968.5
23s rrna um-2552 2'-o-methyltransferaseEDC45_1409Not AvailablePositive1524792 - 152542123461.4
membrane protease ftsh catalytic subunitEDC45_1410Not AvailablePositive1525519 - 152742369935.2
hypothetical proteinEDC45_1411Not AvailableNegative1527741 - 152855330614.7
tat proofreading chaperone fdheEDC45_1412Not AvailableNegative1528634 - 152954833900.5
formate dehydrogenase subunit gammaEDC45_1413Not AvailableNegative1529552 - 153021725721.2
formate dehydrogenase (quinone-dependent) iron-sulfur subunitEDC45_1414Not AvailableNegative1530229 - 153113132884.2
formate dehydrogenase (quinone-dependent) catalytic subunitEDC45_1415Not AvailableNegative1531133 - 1534186113241.0

Displaying genes 1231 – 1240 of 1881 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.