Tepidicella xavieri strain DSM 19605

rodaerobic

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Betaproteobacteria

Order

Burkholderiales

Family

Burkholderiaceae

Genus

Tepidicella

Description

Tepidicella xavieri strain DSM 19605 is a Gram-negative, aerobic bacterium characterized by its rod shape. This strain thrives at an optimal temperature of 45°C and falls within the thermophilic temperature range, indicating its ability to grow in high-temperature environments. Notably, Tepidicella xavieri is non-spore-forming and possesses a single replicon, which is essential for its genetic stability and replication. The thermophilic nature of Tepidicella xavieri suggests its potential ecological role in high-temperature habitats, such as hot springs or geothermal environments. Organisms like Tepidicella xavieri are often involved in biogeochemical cycles, particularly in the degradation of organic materials under elevated temperatures. Their metabolic activities can significantly influence nutrient cycling and energy flow in these extreme ecosystems. In summary, Tepidicella xavieri strain DSM 19605 is a Gram-negative, aerobic rod-shaped bacterium that thrives at elevated temperatures, highlighting its adaptability to thermophilic conditions and its potential significance in high-temperature ecological niches.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassBetaproteobacteria
OrderBurkholderiales
FamilyBurkholderiaceae
GenusTepidicella
SpeciesTepidicella xavieri
Strainstrain DSM 19605

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsaerobic
Optimal temperature45
Temperature rangethermophilic
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
Sporulationnon-spore-forming
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Tepidicella xavieri strain DSM 19605 Ga0244535_136, whole genome

Gene Summary

Adenine Count

472016 bp

Thymine Count

476820 bp

Guanine Count

918001 bp

Cytosine Count

923314 bp

Genome Length

2790625 bp

Protein-coding Genes

2536 genes

Non-Coding Genes

169 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
Tail fiberDFR43_105153Not AvailableNegative1243412 - 124380413978.7
Capsid-related proteinDFR43_105154Not AvailableNegative1243804 - 124429516890.9
Large terminase subunitDFR43_105155Not AvailableNegative1244332 - 124630573095.9
hypothetical proteinDFR43_105156Not AvailableNegative1246379 - 124690919192.9
hypothetical proteinDFR43_105157Not AvailablePositive1247030 - 12472969420.57
hypothetical proteinDFR43_105158Not AvailablePositive1247390 - 12476359211.89
uncharacterized protein duf3489DFR43_105159Not AvailablePositive1247670 - 124825721131.2
hypothetical proteinDFR43_105160Not AvailablePositive1248384 - 124875213365.7
Dna modification methylaseDFR43_105161Not AvailableNegative1248716 - 124998146535.7
Dna methylaseDFR43_105162Not AvailableNegative1249978 - 125156158132.7

Displaying genes 31 – 40 of 2705 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

96 records
Metabolite IDMetabolite nameStructureCAS number
BASm0000217alpha-ribazoleC14H18N2O4Chemical structure of alpha-ribazoleNot available
Average278.3037Da
Monoisotopic278.126657074Da
BASm0000238(R)-3-phenyllactateC9H9O3Chemical structure of (R)-3-phenyllactateNot available
Average165.169Da
Monoisotopic165.05571773Da
BASm0000274aldehydo-D-galacturonateC6H9O7Chemical structure of aldehydo-D-galacturonateNot available
Average193.132Da
Monoisotopic193.0353762Da
BASm0000277keto-L-sorboseC6H12O6Chemical structure of keto-L-sorboseNot available
Average180.1559Da
Monoisotopic180.0633881Da
BASm0000377(S)-malateC4H4O5Chemical structure of (S)-malateNot available
Average132.0716Da
Monoisotopic132.005873238Da
BASm0000387(6R)-5,10-methylene-5,6,7,8-tetrahydrofolateC20H21N7O6Chemical structure of (6R)-5,10-methylene-5,6,7,8-tetrahydrofolateNot available
Average455.432Da
Monoisotopic455.1564286Da
BASm0000400(R)-10-hydroxyoctadecanoateC18H35O3Chemical structure of (R)-10-hydroxyoctadecanoateNot available
Average299.476Da
Monoisotopic299.2591686Da
BASm0000515mycothioneC34H58N4O24S2Chemical structure of mycothioneNot available
Average970.96Da
Monoisotopic970.2882411Da
BASm00006985-dehydro-2-deoxy-D-gluconateC6H9O6Chemical structure of 5-dehydro-2-deoxy-D-gluconateNot available
Average177.133Da
Monoisotopic177.04046159Da
BASm00009123-(indol-3-yl)lactateC11H10NO3Chemical structure of 3-(indol-3-yl)lactateNot available
Average204.206Da
Monoisotopic204.0666168Da

Displaying 1–10 of 96 metabolites

Health Effects

No health effects information available for this bacterium.