Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Thiopseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Thiopseudomonas |
| Species | Thiopseudomonas denitrificans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Thiopseudomonas denitrificans strain DSM 28679
Accession NumberSNYK00000000.1
Gene Summary
Adenine Count
576758 bp
Thymine Count
584960 bp
Guanine Count
850188 bp
Cytosine Count
819662 bp
Genome Length
2832987 bp
Protein-coding Genes
2570 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| na+-transporting nadh:ubiquinone oxidoreductase subunit a | DFQ45_101408 | Not Available | - | 412813 - 414150 | 48710.6 |
| glyceraldehyde 3-phosphate dehydrogenase | DFQ45_101409 | Not Available | - | 414502 - 415947 | 53117.6 |
| transcription-repair coupling factor | DFQ45_101410 | Not Available | + | 416083 - 419517 | 127466.0 |
| peptidoglycan-binding protein csiv | DFQ45_101411 | Not Available | + | 419536 - 420063 | 19391.1 |
| udp-n-acetylmuramate dehydrogenase | DFQ45_101412 | Not Available | - | 420169 - 421197 | 37799.4 |
| protein tyrosine phosphatase | DFQ45_101413 | Not Available | - | 421194 - 421658 | 16974.3 |
| 3-deoxy-manno-octulosonate cytidylyltransferase (cmp-kdo synthetase) | DFQ45_101414 | Not Available | - | 422002 - 422775 | 28384.8 |
| hypothetical protein | DFQ45_101415 | Not Available | - | 422778 - 422966 | 6984.5 |
| lipid-a-disaccharide kinase | DFQ45_101416 | Not Available | - | 422963 - 423976 | 37382.0 |
| biopolymer transport protein exbd | DFQ45_101417 | Not Available | - | 423976 - 424401 | 15284.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.