Idiomarina aquatica strain 18_TX

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Alteromonadales

Family

Idiomarinaceae

Genus

Idiomarina

Description

Idiomarina aquatica strain 18_TX is characterized by the presence of flagella, which suggests a potential for motility in aquatic environments. This trait may facilitate the organism's ability to navigate through its habitat, possibly enhancing its access to nutrients and interaction with other microorganisms. The strain possesses a single replicon, indicating a streamlined genomic structure. This may reflect an adaptation to its ecological niche, allowing for efficient replication and resource utilization. The genomic information for Idiomarina aquatica strain 18_TX is accessible through the accession number SNXI00000000.1, which provides a basis for further genomic studies and comparisons with related strains. Understanding the motility and genomic characteristics of Idiomarina aquatica strain 18_TX contributes to our knowledge of microbial dynamics in aquatic ecosystems. The flagellated nature of this strain may play a significant role in its ecological interactions, such as nutrient cycling and competition with other microorganisms. The streamlined genomic structure could suggest evolutionary adaptations that facilitate survival in specific aquatic environments. Overall, the traits of Idiomarina aquatica strain 18_TX highlight its potential significance in microbial ecology and its role in aquatic habitats.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderAlteromonadales
FamilyIdiomarinaceae
GenusIdiomarina
SpeciesIdiomarina aquatica
Strainstrain 18_TX

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Idiomarina aquatica strain 18_TX Ga0222416_163, whole genome

Gene Summary

Adenine Count

759533 bp

Thymine Count

755552 bp

Guanine Count

716388 bp

Cytosine Count

719056 bp

Genome Length

2951409 bp

Protein-coding Genes

2767 genes

Non-Coding Genes

62 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
glycosyl transferase family 25DEU29_10242Not AvailableNegative435408 - 43613928075.2
glycosyltransferase involved in cell wall biosynthesisDEU29_10243Not AvailableNegative436143 - 43692830586.4
uracil-dna glycosylaseDEU29_10244Not AvailablePositive437023 - 43767323894.4
uncharacterized protein duf3545DEU29_10245Not AvailablePositive437798 - 4379716920.1
myo-inositol-1(or 4)-monophosphataseDEU29_10246Not AvailableNegative438064 - 43884328526.5
trna (cytidine32/uridine32-2'-o)-methyltransferaseDEU29_10247Not AvailablePositive438976 - 43970726734.8
badm/rrf2 family transcriptional regulatorDEU29_10248Not AvailablePositive440081 - 44056317359.7
cysteine desulfurase iscsDEU29_10249Not AvailablePositive440596 - 44174441618.8
peptide-methionine (s)-s-oxide reductaseDEU29_10250Not AvailableNegative441889 - 44242820169.5
nucleoside diphosphate kinaseDEU29_10251Not AvailablePositive442600 - 44303115708.7

Displaying genes 461 – 470 of 2829 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.