Idiomarina aquatica strain 18_TX

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Alteromonadales

Family

Idiomarinaceae

Genus

Idiomarina

Description

Idiomarina aquatica strain 18_TX is characterized by the presence of flagella, which suggests a potential for motility in aquatic environments. This trait may facilitate the organism's ability to navigate through its habitat, possibly enhancing its access to nutrients and interaction with other microorganisms. The strain possesses a single replicon, indicating a streamlined genomic structure. This may reflect an adaptation to its ecological niche, allowing for efficient replication and resource utilization. The genomic information for Idiomarina aquatica strain 18_TX is accessible through the accession number SNXI00000000.1, which provides a basis for further genomic studies and comparisons with related strains. Understanding the motility and genomic characteristics of Idiomarina aquatica strain 18_TX contributes to our knowledge of microbial dynamics in aquatic ecosystems. The flagellated nature of this strain may play a significant role in its ecological interactions, such as nutrient cycling and competition with other microorganisms. The streamlined genomic structure could suggest evolutionary adaptations that facilitate survival in specific aquatic environments. Overall, the traits of Idiomarina aquatica strain 18_TX highlight its potential significance in microbial ecology and its role in aquatic habitats.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderAlteromonadales
FamilyIdiomarinaceae
GenusIdiomarina
SpeciesIdiomarina aquatica
Strainstrain 18_TX

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Idiomarina aquatica strain 18_TX Ga0222416_163, whole genome

Gene Summary

Adenine Count

759533 bp

Thymine Count

755552 bp

Guanine Count

716388 bp

Cytosine Count

719056 bp

Genome Length

2951409 bp

Protein-coding Genes

2767 genes

Non-Coding Genes

62 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
site-specific recombinase xerdDEU29_101300Not AvailablePositive288264 - 28950847532.6
tnpa family transposaseDEU29_101301Not AvailablePositive289533 - 292544116179.0
plasmid stabilization system protein pareDEU29_101302Not AvailableNegative292535 - 29282811064.4
putative transcriptional regulatorDEU29_101303Not AvailableNegative292816 - 29308810685.6
putative integral membrane protein (tigr00698 family)DEU29_101304Not AvailableNegative293249 - 29424435023.3
dna-binding transcriptional lysr family regulatorDEU29_101305Not AvailablePositive294340 - 29519732394.9
cbb3-type cytochrome c oxidase subunit iiiDEU29_101306Not AvailablePositive295384 - 29685052418.0
putative mfs family arabinose efflux permeaseDEU29_101307Not AvailableNegative297074 - 29828844323.5
glyceraldehyde-3-phosphate dehydrogenase (nad+)DEU29_101308Not AvailableNegative298288 - 29928335927.8
acr3 family arsenite transporterDEU29_101309Not AvailableNegative299294 - 30033437867.8

Displaying genes 311 – 320 of 2829 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.