Idiomarina aquatica strain 18_TX

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Alteromonadales

Family

Idiomarinaceae

Genus

Idiomarina

Description

Idiomarina aquatica strain 18_TX is characterized by the presence of flagella, which suggests a potential for motility in aquatic environments. This trait may facilitate the organism's ability to navigate through its habitat, possibly enhancing its access to nutrients and interaction with other microorganisms. The strain possesses a single replicon, indicating a streamlined genomic structure. This may reflect an adaptation to its ecological niche, allowing for efficient replication and resource utilization. The genomic information for Idiomarina aquatica strain 18_TX is accessible through the accession number SNXI00000000.1, which provides a basis for further genomic studies and comparisons with related strains. Understanding the motility and genomic characteristics of Idiomarina aquatica strain 18_TX contributes to our knowledge of microbial dynamics in aquatic ecosystems. The flagellated nature of this strain may play a significant role in its ecological interactions, such as nutrient cycling and competition with other microorganisms. The streamlined genomic structure could suggest evolutionary adaptations that facilitate survival in specific aquatic environments. Overall, the traits of Idiomarina aquatica strain 18_TX highlight its potential significance in microbial ecology and its role in aquatic habitats.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderAlteromonadales
FamilyIdiomarinaceae
GenusIdiomarina
SpeciesIdiomarina aquatica
Strainstrain 18_TX

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Idiomarina aquatica strain 18_TX Ga0222416_163, whole genome

Gene Summary

Adenine Count

759533 bp

Thymine Count

755552 bp

Guanine Count

716388 bp

Cytosine Count

719056 bp

Genome Length

2951409 bp

Protein-coding Genes

2767 genes

Non-Coding Genes

62 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
translation elongation factor ts (ef-ts)DEU29_1017Not AvailablePositive6418 - 729631415.5
uridylate kinaseDEU29_1018Not AvailablePositive7415 - 815526491.2
ribosome recycling factorDEU29_1019Not AvailablePositive8189 - 874620922.0
undecaprenyl pyrophosphate synthetaseDEU29_10110Not AvailablePositive8825 - 959829117.8
phosphatidate cytidylyltransferaseDEU29_10111Not AvailablePositive9710 - 1046527403.0
1-deoxy-d-xylulose 5-phosphate reductoisomeraseDEU29_10112Not AvailablePositive10469 - 1166242579.0
site-2 proteaseDEU29_10113Not AvailablePositive11655 - 1301048815.1
beta-barrel assembly machine subunit bamaDEU29_10114Not AvailablePositive13041 - 1552492668.9
periplasmic chaperone for outer membrane proteins skpDEU29_10115Not AvailablePositive15576 - 1609119546.2
udp-3-o-[3-hydroxymyristoyl] glucosamine n-acyltransferaseDEU29_10116Not AvailablePositive16095 - 1712335884.6

Displaying genes 11 – 20 of 2829 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.