Flagellimonas alvinocaridis strain SCR12

rod

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Flavobacteriia

Order

Flavobacteriales

Family

Flavobacteriaceae

Genus

Flagellimonas

Description

Flagellimonas alvinocaridis strain SCR12 is characterized as a Gram-negative, rod-shaped bacterium. It possesses a single replicon, indicating a streamlined genetic structure. The strain is documented under the accession number SNTZ00000000.1, which provides a reference for its genomic data. The Gram-negative classification is significant as it suggests specific structural components in the bacterial cell wall, including a thin peptidoglycan layer surrounded by an outer membrane containing lipopolysaccharides. This structure can influence the bacterium's interactions with its environment, including its susceptibility to antibiotics and its ability to form biofilms. As a member of the genus Flagellimonas, this strain is likely adapted to specific ecological niches, potentially including marine or deep-sea environments, given the typical habitats of related species. The rod shape may confer advantages in motility and nutrient acquisition in such environments, although specific ecological roles for Flagellimonas alvinocaridis strain SCR12 are not delineated in the available data. In summary, the characteristics of Flagellimonas alvinocaridis strain SCR12, including its Gram-negative status, rod shape, and singular replicon, suggest specialized adaptations that may allow it to thrive in specific ecological contexts. Further investigation into its ecological interactions could provide insights into its role in microbial communities.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassFlavobacteriia
OrderFlavobacteriales
FamilyFlavobacteriaceae
GenusFlagellimonas
SpeciesFlagellimonas alvinocaridis
Strainstrain SCR12

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Flagellimonas alvinocaridis strain SCR12 scaffold_199, whole

Gene Summary

Adenine Count

1075594 bp

Thymine Count

1084480 bp

Guanine Count

799267 bp

Cytosine Count

786615 bp

Genome Length

3747248 bp

Protein-coding Genes

3340 genes

Non-Coding Genes

50 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
t9ss type a sorting domain-containing proteinEZV76_00780Not AvailableNegative179145 - 182921135005.0
bifunctional riboflavin kinase/fad synthetaseEZV76_00785Not AvailablePositive182978 - 18391035204.5
httm domain-containing proteinEZV76_00790Not AvailablePositive183911 - 18522751474.6
serine--trna ligaseEZV76_00795Not AvailablePositive185279 - 18655047325.3
tetratricopeptide repeat proteinEZV76_00800Not AvailablePositive186657 - 18841467952.9
duf4286 family proteinEZV76_00805Not AvailablePositive188447 - 18876412396.0
gamma-glutamylcyclotransferaseEZV76_00810Not AvailablePositive188768 - 18907611967.2
16s rrna (adenine(1518)-n(6)/adenine(1519)-n(6))- dimethyltransferase rsmaEZV76_00815Not AvailablePositive189057 - 18996534479.6
magnesium transporterEZV76_00820Not AvailablePositive189952 - 19130449681.5
cupin domain-containing proteinEZV76_00825Not AvailablePositive191314 - 19167914103.0

Displaying genes 161 – 170 of 3390 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.