Flagellimonas alvinocaridis strain SCR12

rod

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Flavobacteriia

Order

Flavobacteriales

Family

Flavobacteriaceae

Genus

Flagellimonas

Description

Flagellimonas alvinocaridis strain SCR12 is characterized as a Gram-negative, rod-shaped bacterium. It possesses a single replicon, indicating a streamlined genetic structure. The strain is documented under the accession number SNTZ00000000.1, which provides a reference for its genomic data. The Gram-negative classification is significant as it suggests specific structural components in the bacterial cell wall, including a thin peptidoglycan layer surrounded by an outer membrane containing lipopolysaccharides. This structure can influence the bacterium's interactions with its environment, including its susceptibility to antibiotics and its ability to form biofilms. As a member of the genus Flagellimonas, this strain is likely adapted to specific ecological niches, potentially including marine or deep-sea environments, given the typical habitats of related species. The rod shape may confer advantages in motility and nutrient acquisition in such environments, although specific ecological roles for Flagellimonas alvinocaridis strain SCR12 are not delineated in the available data. In summary, the characteristics of Flagellimonas alvinocaridis strain SCR12, including its Gram-negative status, rod shape, and singular replicon, suggest specialized adaptations that may allow it to thrive in specific ecological contexts. Further investigation into its ecological interactions could provide insights into its role in microbial communities.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassFlavobacteriia
OrderFlavobacteriales
FamilyFlavobacteriaceae
GenusFlagellimonas
SpeciesFlagellimonas alvinocaridis
Strainstrain SCR12

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Flagellimonas alvinocaridis strain SCR12 scaffold_199, whole

Gene Summary

Adenine Count

1075594 bp

Thymine Count

1084480 bp

Guanine Count

799267 bp

Cytosine Count

786615 bp

Genome Length

3747248 bp

Protein-coding Genes

3340 genes

Non-Coding Genes

50 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
phosphoribosylanthranilate isomeraseEZV76_09710Not AvailablePositive2123313 - 212400826081.0
tryptophan synthase subunit betaEZV76_09715Not AvailablePositive2124071 - 212525242913.3
tryptophan synthase subunit alphaEZV76_09720Not AvailablePositive2125318 - 212607928146.8
m20/m25/m40 family metallo-hydrolaseEZV76_09725Not AvailablePositive2126113 - 212760955446.0
uracil-dna glycosylase family proteinEZV76_09730Not AvailableNegative2127606 - 212828325729.2
hypothetical proteinEZV76_09735Not AvailableNegative2128283 - 212900828434.2
phosphoenolpyruvate carboxylaseEZV76_09740Not AvailableNegative2129080 - 213162698555.5
peroxide stress protein yaaaEZV76_09745Not AvailableNegative2131792 - 213255329242.3
rlua family pseudouridine synthaseEZV76_09750Not AvailableNegative2132642 - 213367039123.5
pasta domain-containing proteinEZV76_09755Not AvailableNegative2133673 - 213426021880.6

Displaying genes 1941 – 1950 of 3390 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.