Flagellimonas alvinocaridis strain SCR12

rod

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Flavobacteriia

Order

Flavobacteriales

Family

Flavobacteriaceae

Genus

Flagellimonas

Description

Flagellimonas alvinocaridis strain SCR12 is characterized as a Gram-negative, rod-shaped bacterium. It possesses a single replicon, indicating a streamlined genetic structure. The strain is documented under the accession number SNTZ00000000.1, which provides a reference for its genomic data. The Gram-negative classification is significant as it suggests specific structural components in the bacterial cell wall, including a thin peptidoglycan layer surrounded by an outer membrane containing lipopolysaccharides. This structure can influence the bacterium's interactions with its environment, including its susceptibility to antibiotics and its ability to form biofilms. As a member of the genus Flagellimonas, this strain is likely adapted to specific ecological niches, potentially including marine or deep-sea environments, given the typical habitats of related species. The rod shape may confer advantages in motility and nutrient acquisition in such environments, although specific ecological roles for Flagellimonas alvinocaridis strain SCR12 are not delineated in the available data. In summary, the characteristics of Flagellimonas alvinocaridis strain SCR12, including its Gram-negative status, rod shape, and singular replicon, suggest specialized adaptations that may allow it to thrive in specific ecological contexts. Further investigation into its ecological interactions could provide insights into its role in microbial communities.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassFlavobacteriia
OrderFlavobacteriales
FamilyFlavobacteriaceae
GenusFlagellimonas
SpeciesFlagellimonas alvinocaridis
Strainstrain SCR12

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Flagellimonas alvinocaridis strain SCR12 scaffold_199, whole

Gene Summary

Adenine Count

1075594 bp

Thymine Count

1084480 bp

Guanine Count

799267 bp

Cytosine Count

786615 bp

Genome Length

3747248 bp

Protein-coding Genes

3340 genes

Non-Coding Genes

50 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
lps export abc transporter atp-binding proteinEZV76_06985Not AvailableNegative1519312 - 152005227606.0
carboxymuconolactone decarboxylase family proteinEZV76_06990Not AvailableNegative1520110 - 152046012982.6
twin-arginine translocase subunit tatcEZV76_06995Not AvailableNegative1520450 - 152129231742.5
kpsf/gutq family sugar-phosphate isomeraseEZV76_07000Not AvailableNegative1521292 - 152225734041.4
dna helicase recqEZV76_07005Not AvailablePositive1522446 - 152464782185.8
duf2752 domain-containing proteinEZV76_07010Not AvailableNegative1524644 - 152503914426.5
cd225/dispanin family proteinEZV76_07015Not AvailableNegative1525023 - 15252929609.86
duf4190 domain-containing proteinEZV76_07020Not AvailableNegative1525325 - 152564812060.0
duf2752 domain-containing proteinEZV76_07025Not AvailableNegative1525659 - 152596711472.7
dna mismatch repair protein mutsEZV76_07030Not AvailablePositive1526049 - 152659120819.2

Displaying genes 1401 – 1410 of 3390 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.