Paenibacillus amylolyticus strain S-B4

Gram-positiveRodMotileAerobic

Kingdom

Bacillati

Phylum

Bacillota

Class

Bacilli

Order

Caryophanales

Family

Paenibacillaceae

Genus

Paenibacillus

Description

Paenibacillus amylolyticus strain S-B4 is a gram-positive, rod-shaped bacterium known for its chemoheterotrophic energy source. This strain is characterized by its ability to form chains and is aerobic, requiring oxygen for its metabolic processes. It possesses flagella, which contribute to its mobility, allowing it to navigate its soil habitat efficiently. The optimal growth temperature for P. amylolyticus S-B4 is 30°C, placing it within the mesophilic temperature range. This strain is also capable of sporulation, a process that enables it to endure unfavorable environmental conditions by forming resilient spores. P. amylolyticus S-B4 has been identified as a host-associated bacterium, with known associations to several species, including Homo sapiens, Triticum aestivum (wheat), Canis lupus familiaris (domestic dog), and Tipula abdominalis (a species of crane fly). These interactions suggest that P. amylolyticus S-B4 may play a role in the soil microbiome associated with plants and animals, potentially influencing nutrient cycling and soil health. The strain's single replicon and specific habitat preferences highlight its ecological niche and functional importance within its environment. Understanding the biology and ecology of P. amylolyticus S-B4 could provide insights into its role in soil ecosystems and its potential applications in agriculture or bioremediation.

Taxonomy

KingdomBacillati
PhylumBacillota
ClassBacilli
OrderCaryophanales
FamilyPaenibacillaceae
GenusPaenibacillus
SpeciesPaenibacillus amylolyticus
Strainstrain S-B4

Profile

Physiology
Gram staining propertiesPositive
ShapeRod
MobilityYes
Flagellar presenceYes
Number of membranesNot Available
Image of Paenibacillus amylolyticus strain S-B4
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsAerobic
Optimal temperature30
Temperature rangeMesophilic
HabitatSoil
Biotic relationshipNot Available
Host(s)Homo sapiens, Triticum aestivum, Canis lupus familiaris
Cell arrangementChains
SporulationSporulating
Energy sourceChemoheterotroph
PathogenicityNot Available

Genome Summary

Paenibacillus amylolyticus strain S-B4

Gene Summary

Adenine Count

1917411 bp

Thymine Count

1912873 bp

Guanine Count

1611179 bp

Cytosine Count

1625860 bp

Genome Length

7067323 bp

Protein-coding Genes

5995 genes

Non-Coding Genes

88 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
ribose-phosphate pyrophosphokinaseE2R58_27955Not AvailableNegative6455611 - 645655834355.7
histidinol-phosphatase hisjE2R58_27960Not AvailableNegative6456639 - 645746331210.3
bifunctional phosphoribosyl-amp cyclohydrolase/phosphoribosyl-atp diphosphatase hisieE2R58_27965Not AvailableNegative6457476 - 645820127193.1
imidazole glycerol phosphate synthase subunit hisfE2R58_27970Not AvailableNegative6458203 - 645896427155.5
1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino]imidazole-4- carboxamide isomeraseE2R58_27975Not AvailableNegative6458995 - 645972925835.8
imidazole glycerol phosphate synthase subunit hishE2R58_27980Not AvailableNegative6459792 - 646041822223.8
imidazoleglycerol-phosphate dehydratase hisbE2R58_27985Not AvailableNegative6460422 - 646105123515.9
histidinol dehydrogenaseE2R58_27990Not AvailableNegative6461044 - 646234846656.4
atp phosphoribosyltransferaseE2R58_27995Not AvailableNegative6462476 - 646313524288.7
atp phosphoribosyltransferase regulatory subunitE2R58_28000Not AvailableNegative6463137 - 646433643615.1

Displaying genes 5501 – 5510 of 6083 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.