Paenibacillus amylolyticus strain S-B4

Gram-positiveRodMotileAerobic

Kingdom

Bacillati

Phylum

Bacillota

Class

Bacilli

Order

Caryophanales

Family

Paenibacillaceae

Genus

Paenibacillus

Description

Paenibacillus amylolyticus strain S-B4 is a gram-positive, rod-shaped bacterium known for its chemoheterotrophic energy source. This strain is characterized by its ability to form chains and is aerobic, requiring oxygen for its metabolic processes. It possesses flagella, which contribute to its mobility, allowing it to navigate its soil habitat efficiently. The optimal growth temperature for P. amylolyticus S-B4 is 30°C, placing it within the mesophilic temperature range. This strain is also capable of sporulation, a process that enables it to endure unfavorable environmental conditions by forming resilient spores. P. amylolyticus S-B4 has been identified as a host-associated bacterium, with known associations to several species, including Homo sapiens, Triticum aestivum (wheat), Canis lupus familiaris (domestic dog), and Tipula abdominalis (a species of crane fly). These interactions suggest that P. amylolyticus S-B4 may play a role in the soil microbiome associated with plants and animals, potentially influencing nutrient cycling and soil health. The strain's single replicon and specific habitat preferences highlight its ecological niche and functional importance within its environment. Understanding the biology and ecology of P. amylolyticus S-B4 could provide insights into its role in soil ecosystems and its potential applications in agriculture or bioremediation.

Taxonomy

KingdomBacillati
PhylumBacillota
ClassBacilli
OrderCaryophanales
FamilyPaenibacillaceae
GenusPaenibacillus
SpeciesPaenibacillus amylolyticus
Strainstrain S-B4

Profile

Physiology
Gram staining propertiesPositive
ShapeRod
MobilityYes
Flagellar presenceYes
Number of membranesNot Available
Image of Paenibacillus amylolyticus strain S-B4
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsAerobic
Optimal temperature30
Temperature rangeMesophilic
HabitatSoil
Biotic relationshipNot Available
Host(s)Homo sapiens, Triticum aestivum, Canis lupus familiaris
Cell arrangementChains
SporulationSporulating
Energy sourceChemoheterotroph
PathogenicityNot Available

Genome Summary

Paenibacillus amylolyticus strain S-B4

Gene Summary

Adenine Count

1917411 bp

Thymine Count

1912873 bp

Guanine Count

1611179 bp

Cytosine Count

1625860 bp

Genome Length

7067323 bp

Protein-coding Genes

5995 genes

Non-Coding Genes

88 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
bifunctional cystathionine gamma-lyase/homocysteine desulfhydraseE2R58_14250Not AvailablePositive3240994 - 324212741203.4
hypothetical proteinE2R58_14255Not AvailableNegative3242908 - 324325213155.0
smc family atpaseE2R58_14260Not AvailableNegative3243842 - 3247261126595.0
exonuclease sbccd subunit dE2R58_14265Not AvailableNegative3247258 - 324844243495.5
helicase-exonuclease addab subunit addaE2R58_14270Not AvailableNegative3248502 - 3252920166079.0
helicase-exonuclease addab subunit addbE2R58_14275Not AvailableNegative3252917 - 3256420131879.0
class i sam-dependent rrna methyltransferaseE2R58_14280Not AvailableNegative3256842 - 325821851133.0
na/pi cotransporter family proteinE2R58_14285Not AvailablePositive3258772 - 325977334850.5
nudix domain-containing proteinE2R58_14290Not AvailableNegative3259837 - 326027416420.4
trna (n(6)-l-threonylcarbamoyladenosine(37)-c(2))- methylthiotransferase mtabE2R58_14295Not AvailableNegative3260386 - 326173251092.9

Displaying genes 2821 – 2830 of 6083 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.