Seonamhaeicola sediminis strain W255

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Flavobacteriia

Order

Flavobacteriales

Family

Flavobacteriaceae

Genus

Seonamhaeicola

Description

Seonamhaeicola sediminis strain W255 is a distinct bacterial strain characterized by its single replicon. This trait indicates a streamlined genome structure, which may contribute to its adaptability in various environments. The strain is cataloged under the accession number SMZJ00000000.2, serving as a reference for genomic studies and further research. As a member of the Seonamhaeicola genus, S. sediminis is likely to inhabit sedimentary environments, where it may play a role in nutrient cycling and the degradation of organic materials. The presence of a single replicon can suggest a simplified regulation of genetic processes, potentially enhancing its efficiency in survival and reproduction in its ecological niche. While specific metabolic capabilities and ecological interactions of S. sediminis strain W255 are not detailed, its classification implies potential interactions with other microorganisms in sedimentary ecosystems. Understanding such interactions could provide insights into the functional roles of this strain in its habitat, particularly in the context of biogeochemical cycles. Overall, the unique genomic structure of Seonamhaeicola sediminis strain W255 may offer opportunities for further exploration of its ecological significance and potential applications in biotechnology.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassFlavobacteriia
OrderFlavobacteriales
FamilyFlavobacteriaceae
GenusSeonamhaeicola
SpeciesSeonamhaeicola sediminis
Strainstrain W255

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Seonamhaeicola sediminis strain W255 scaffold50-size281, whole

Gene Summary

Adenine Count

Not Available

Thymine Count

Not Available

Guanine Count

Not Available

Cytosine Count

Not Available

Genome Length

Not Available

Protein-coding Genes

Not Available

Non-Coding Genes

Not Available

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
uroporphyrinogen decarboxylaseE1J38_003835Not AvailablePositive1006576 - 100760438429.5
potassium transporter trkhE1J38_003840Not AvailablePositive1007658 - 100901350305.9
ei24 domain-containing proteinE1J38_003845Not AvailablePositive1009017 - 100976027853.2
oxygen-dependent coproporphyrinogen oxidaseE1J38_003850Not AvailablePositive1009760 - 101068335764.3
duf4421 domain-containing proteinE1J38_003855Not AvailablePositive1010674 - 101163036690.5
porphobilinogen synthaseE1J38_003860Not AvailablePositive1011641 - 101263036839.3
hypothetical proteinE1J38_003865Not AvailableNegative1012627 - 1015467107770.0
hlyc/corc family transporterE1J38_003870Not AvailablePositive1015571 - 101668041099.7
methylated-dna--[protein]-cysteine s-methyltransferaseE1J38_003875Not AvailablePositive1016680 - 101715317735.2
serine hydrolaseE1J38_003880Not AvailablePositive1017202 - 101835644420.7

Displaying genes 771 – 780 of 2993 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.