Seonamhaeicola sediminis strain W255

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Flavobacteriia

Order

Flavobacteriales

Family

Flavobacteriaceae

Genus

Seonamhaeicola

Description

Seonamhaeicola sediminis strain W255 is a distinct bacterial strain characterized by its single replicon. This trait indicates a streamlined genome structure, which may contribute to its adaptability in various environments. The strain is cataloged under the accession number SMZJ00000000.2, serving as a reference for genomic studies and further research. As a member of the Seonamhaeicola genus, S. sediminis is likely to inhabit sedimentary environments, where it may play a role in nutrient cycling and the degradation of organic materials. The presence of a single replicon can suggest a simplified regulation of genetic processes, potentially enhancing its efficiency in survival and reproduction in its ecological niche. While specific metabolic capabilities and ecological interactions of S. sediminis strain W255 are not detailed, its classification implies potential interactions with other microorganisms in sedimentary ecosystems. Understanding such interactions could provide insights into the functional roles of this strain in its habitat, particularly in the context of biogeochemical cycles. Overall, the unique genomic structure of Seonamhaeicola sediminis strain W255 may offer opportunities for further exploration of its ecological significance and potential applications in biotechnology.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassFlavobacteriia
OrderFlavobacteriales
FamilyFlavobacteriaceae
GenusSeonamhaeicola
SpeciesSeonamhaeicola sediminis
Strainstrain W255

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Seonamhaeicola sediminis strain W255 scaffold50-size281, whole

Gene Summary

Adenine Count

Not Available

Thymine Count

Not Available

Guanine Count

Not Available

Cytosine Count

Not Available

Genome Length

Not Available

Protein-coding Genes

Not Available

Non-Coding Genes

Not Available

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
laci family transcriptional regulatorE1J38_003175Not AvailablePositive850424 - 85146138407.2
trna epoxyqueuosine(34) reductase quegE1J38_003180Not AvailableNegative851458 - 85238435304.1
holliday junction branch migration dna helicase ruvbE1J38_003185Not AvailableNegative852421 - 85344337538.1
hypothetical proteinE1J38_003190Not AvailableNegative853492 - 8537078344.75
ompa family proteinE1J38_003195Not AvailableNegative853853 - 85573971181.0
type ix secretion system membrane protein porp/sprfE1J38_003200Not AvailableNegative855756 - 85671235021.7
gliding motility-associated c-terminal domain-containing proteinE1J38_003205Not AvailableNegative856738 - 860898145527.0
cytochrome c oxidase subunit iE1J38_003210Not AvailableNegative861134 - 86292466505.9
cytochrome c oxidase subunit iiE1J38_003215Not AvailableNegative862954 - 86403040565.5
quinol:cytochrome c oxidoreductaseE1J38_003220Not AvailableNegative864062 - 86541751751.1

Displaying genes 641 – 650 of 2993 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.