Seonamhaeicola sediminis strain W255

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Flavobacteriia

Order

Flavobacteriales

Family

Flavobacteriaceae

Genus

Seonamhaeicola

Description

Seonamhaeicola sediminis strain W255 is a distinct bacterial strain characterized by its single replicon. This trait indicates a streamlined genome structure, which may contribute to its adaptability in various environments. The strain is cataloged under the accession number SMZJ00000000.2, serving as a reference for genomic studies and further research. As a member of the Seonamhaeicola genus, S. sediminis is likely to inhabit sedimentary environments, where it may play a role in nutrient cycling and the degradation of organic materials. The presence of a single replicon can suggest a simplified regulation of genetic processes, potentially enhancing its efficiency in survival and reproduction in its ecological niche. While specific metabolic capabilities and ecological interactions of S. sediminis strain W255 are not detailed, its classification implies potential interactions with other microorganisms in sedimentary ecosystems. Understanding such interactions could provide insights into the functional roles of this strain in its habitat, particularly in the context of biogeochemical cycles. Overall, the unique genomic structure of Seonamhaeicola sediminis strain W255 may offer opportunities for further exploration of its ecological significance and potential applications in biotechnology.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassFlavobacteriia
OrderFlavobacteriales
FamilyFlavobacteriaceae
GenusSeonamhaeicola
SpeciesSeonamhaeicola sediminis
Strainstrain W255

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Seonamhaeicola sediminis strain W255 scaffold50-size281, whole

Gene Summary

Adenine Count

Not Available

Thymine Count

Not Available

Guanine Count

Not Available

Cytosine Count

Not Available

Genome Length

Not Available

Protein-coding Genes

Not Available

Non-Coding Genes

Not Available

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
duf368 domain-containing proteinE1J38_012185Not AvailableNegative2934670 - 293559333570.9
tetratricopeptide repeat proteinE1J38_012190Not AvailableNegative2935733 - 293712154443.9
aspartate aminotransferase family proteinE1J38_012195Not AvailableNegative2937276 - 293846043314.2
hypothetical proteinE1J38_012200Not AvailableNegative2938464 - 294061182028.0
adenylosuccinate synthaseE1J38_012205Not AvailableNegative2940712 - 294198647016.2
transcriptional repressorE1J38_012210Not AvailableNegative2942000 - 294245217745.9
bifunctional (p)ppgpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolaseE1J38_012215Not AvailableNegative2942479 - 294469884403.4
non-canonical purine ntp diphosphataseE1J38_012220Not AvailableNegative2944774 - 294534921391.6
ribosome-associated translation inhibitor raiaE1J38_012225Not AvailablePositive2945606 - 294590511569.8
23s rrna (pseudouridine(1915)-n(3))-methyltransferase rlmhE1J38_012230Not AvailableNegative2945951 - 294642418287.3

Displaying genes 2431 – 2440 of 2993 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.