Seonamhaeicola sediminis strain W255

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Flavobacteriia

Order

Flavobacteriales

Family

Flavobacteriaceae

Genus

Seonamhaeicola

Description

Seonamhaeicola sediminis strain W255 is a distinct bacterial strain characterized by its single replicon. This trait indicates a streamlined genome structure, which may contribute to its adaptability in various environments. The strain is cataloged under the accession number SMZJ00000000.2, serving as a reference for genomic studies and further research. As a member of the Seonamhaeicola genus, S. sediminis is likely to inhabit sedimentary environments, where it may play a role in nutrient cycling and the degradation of organic materials. The presence of a single replicon can suggest a simplified regulation of genetic processes, potentially enhancing its efficiency in survival and reproduction in its ecological niche. While specific metabolic capabilities and ecological interactions of S. sediminis strain W255 are not detailed, its classification implies potential interactions with other microorganisms in sedimentary ecosystems. Understanding such interactions could provide insights into the functional roles of this strain in its habitat, particularly in the context of biogeochemical cycles. Overall, the unique genomic structure of Seonamhaeicola sediminis strain W255 may offer opportunities for further exploration of its ecological significance and potential applications in biotechnology.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassFlavobacteriia
OrderFlavobacteriales
FamilyFlavobacteriaceae
GenusSeonamhaeicola
SpeciesSeonamhaeicola sediminis
Strainstrain W255

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Seonamhaeicola sediminis strain W255 scaffold50-size281, whole

Gene Summary

Adenine Count

Not Available

Thymine Count

Not Available

Guanine Count

Not Available

Cytosine Count

Not Available

Genome Length

Not Available

Protein-coding Genes

Not Available

Non-Coding Genes

Not Available

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
atp-dependent chaperone clpbE1J38_007810Not AvailableNegative1920872 - 192347897684.1
bacillithiol system redox-active protein ytxjE1J38_007815Not AvailablePositive1923644 - 192405415596.0
duf1080 domain-containing proteinE1J38_007820Not AvailablePositive1924175 - 192482224436.9
hotdog fold thioesteraseE1J38_007825Not AvailablePositive1924903 - 192532815737.3
isochorismate synthaseE1J38_007830Not AvailablePositive1925334 - 192646442841.2
2-succinyl-5-enolpyruvyl-6-hydroxy-3- cyclohexene-1-carboxylic-acid synthaseE1J38_007835Not AvailablePositive1926573 - 192832765982.8
duf2853 family proteinE1J38_007840Not AvailablePositive1928530 - 192886812209.4
gntr family transcriptional regulatorE1J38_007845Not AvailablePositive1929175 - 193000831992.5
trna uridine-5-carboxymethylaminomethyl(34) synthesis gtpase mnmeE1J38_007850Not AvailablePositive1930039 - 193143650836.0
helix-turn-helix domain-containing proteinE1J38_007855Not AvailablePositive1931654 - 193201913915.9

Displaying genes 1561 – 1570 of 2993 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.