Seonamhaeicola sediminis strain W255

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Flavobacteriia

Order

Flavobacteriales

Family

Flavobacteriaceae

Genus

Seonamhaeicola

Description

Seonamhaeicola sediminis strain W255 is a distinct bacterial strain characterized by its single replicon. This trait indicates a streamlined genome structure, which may contribute to its adaptability in various environments. The strain is cataloged under the accession number SMZJ00000000.2, serving as a reference for genomic studies and further research. As a member of the Seonamhaeicola genus, S. sediminis is likely to inhabit sedimentary environments, where it may play a role in nutrient cycling and the degradation of organic materials. The presence of a single replicon can suggest a simplified regulation of genetic processes, potentially enhancing its efficiency in survival and reproduction in its ecological niche. While specific metabolic capabilities and ecological interactions of S. sediminis strain W255 are not detailed, its classification implies potential interactions with other microorganisms in sedimentary ecosystems. Understanding such interactions could provide insights into the functional roles of this strain in its habitat, particularly in the context of biogeochemical cycles. Overall, the unique genomic structure of Seonamhaeicola sediminis strain W255 may offer opportunities for further exploration of its ecological significance and potential applications in biotechnology.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassFlavobacteriia
OrderFlavobacteriales
FamilyFlavobacteriaceae
GenusSeonamhaeicola
SpeciesSeonamhaeicola sediminis
Strainstrain W255

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Seonamhaeicola sediminis strain W255 scaffold50-size281, whole

Gene Summary

Adenine Count

Not Available

Thymine Count

Not Available

Guanine Count

Not Available

Cytosine Count

Not Available

Genome Length

Not Available

Protein-coding Genes

Not Available

Non-Coding Genes

Not Available

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
tuse/dsrc/dsvc family sulfur relay proteinE1J38_007050Not AvailablePositive1742768 - 174307611402.7
hypothetical proteinE1J38_007055Not AvailablePositive1743099 - 174357217597.8
xdhc family proteinE1J38_007060Not AvailablePositive1743820 - 174484237793.7
nucleotidyltransferase family proteinE1J38_007065Not AvailablePositive1744844 - 174543721776.4
ssra-binding proteinE1J38_007070Not AvailableNegative1745438 - 17455905744.35
calcium/sodium antiporterE1J38_007075Not AvailablePositive1746346 - 174729033467.4
glutamine synthetaseE1J38_007080Not AvailableNegative1747369 - 174839138183.7
glutamine synthetase type iiiE1J38_007085Not AvailablePositive1748643 - 175082981763.7
phosphoribosylformylglycinamidine cyclo-ligaseE1J38_007090Not AvailablePositive1750913 - 175209142967.4
duf3078 domain-containing proteinE1J38_007095Not AvailablePositive1752162 - 175312136541.0

Displaying genes 1411 – 1420 of 2993 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.