Arthrobacter terricola strain JH1-1

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Micrococcales

Family

Micrococcaceae

Genus

Arthrobacter

Description

Arthrobacter terricola strain JH1-1 is a notable bacterium characterized by the presence of flagella, which suggests motility and potential environmental adaptability. This strain is defined by having a single replicon, indicating a streamlined genomic structure that may facilitate efficient replication and resource utilization in its habitat. The accession number for this strain is SMRU00000000.1, which provides a reference point for researchers interested in studying its genetic and phenotypic characteristics further. The presence of flagella is particularly significant as it can affect the organism's ability to colonize diverse environments, enhance nutrient acquisition, and evade predators. In a broader ecological context, Arthrobacter spp., including strain JH1-1, are often found in soil and play a crucial role in nutrient cycling and organic matter decomposition. Their motility may contribute to their effectiveness in these processes, allowing them to navigate through soil matrices to access organic substrates. Understanding the traits of strain JH1-1 can help elucidate its role in soil ecosystems and its potential applications in bioremediation or agriculture. This knowledge is essential for harnessing the capabilities of this bacterium in environmental biotechnology.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderMicrococcales
FamilyMicrococcaceae
GenusArthrobacter
SpeciesArthrobacter terricola
Strainstrain JH1-1

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Arthrobacter terricola strain JH1-1 contig108, whole genome

Gene Summary

Adenine Count

1017342 bp

Thymine Count

1008996 bp

Guanine Count

1767917 bp

Cytosine Count

1776744 bp

Genome Length

5571086 bp

Protein-coding Genes

4993 genes

Non-Coding Genes

136 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
nad(p)/fad-dependent oxidoreductaseE1809_17695Not AvailableNegative3762074 - 376337247928.5
sdr family oxidoreductaseE1809_17700Not AvailableNegative3763419 - 376413824853.7
mfs transporterE1809_17705Not AvailableNegative3764158 - 376553748814.0
lysr family transcriptional regulatorE1809_17710Not AvailablePositive3765675 - 376659833582.1
lysr family transcriptional regulatorE1809_17715Not AvailableNegative3766595 - 376752433173.8
rida family proteinE1809_17720Not AvailableNegative3767571 - 376785810040.9
arge/dape family deacylaseE1809_17725Not AvailableNegative3767867 - 376900039817.9
diaminopropionate ammonia-lyaseE1809_17730Not AvailableNegative3769055 - 377019139731.1
amino acid permeaseE1809_17735Not AvailablePositive3770458 - 377196352984.7
choline oxidaseE1809_17745Not AvailableNegative3774006 - 377564659928.6

Displaying genes 3531 – 3540 of 5129 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.