Delftia tsuruhatensis strain 11304

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Betaproteobacteria

Order

Burkholderiales

Family

Comamonadaceae

Genus

Delftia

Description

Delftia tsuruhatensis strain 11304 is a notable bacterium primarily found in the roots of plants. This strain possesses a single replicon, indicating a streamlined genomic structure, which may contribute to its adaptability and efficiency in its habitat. It is characterized by the presence of flagella, allowing for motility, which can be advantageous for colonizing root environments and interacting with plant hosts. The strain has been identified in association with specific plant hosts, namely Triticum aestivum (common wheat) and Ipomoea batatas (sweet potato). This association suggests a potential role in plant-microbe interactions, which might include promoting plant growth or influencing nutrient uptake in these crops. The accession number for this strain is SMMJ00000000.1, which serves as a reference for genetic and genomic studies. Understanding the characteristics and ecological roles of Delftia tsuruhatensis strain 11304 may provide insights into its potential applications in agriculture, particularly in enhancing the health and productivity of economically important plants like wheat and sweet potato. The presence of flagella further indicates its capability to navigate and establish itself within the complex root microbiome, potentially playing a role in the overall health of the plant ecosystem.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassBetaproteobacteria
OrderBurkholderiales
FamilyComamonadaceae
GenusDelftia
SpeciesDelftia tsuruhatensis
Strainstrain 11304

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Delftia tsuruhatensis strain 11304
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
Habitatroots
Biotic relationshipNot Available
Host(s)Homo sapiens, Triticum aestivum, Ipomoea batatas
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Delftia tsuruhatensis strain 11304 scf_39096_215, whole genome

Gene Summary

Adenine Count

1098172 bp

Thymine Count

1099782 bp

Guanine Count

2208383 bp

Cytosine Count

2209339 bp

Genome Length

6615676 bp

Protein-coding Genes

5817 genes

Non-Coding Genes

282 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
hypothetical proteinEZI45_24760Not AvailableNegative5347273 - 534768615545.8
hypothetical proteinEZI45_24765Not AvailableNegative5347838 - 53480658288.68
hypothetical proteinEZI45_24770Not AvailableNegative5348062 - 534847214623.6
Gp9EZI45_24775Not AvailableNegative5348587 - 534894313204.6
hypothetical proteinEZI45_24780Not AvailableNegative5349140 - 53493889199.99
Gp21EZI45_24785Not AvailablePositive5349469 - 535004120309.2
hypothetical proteinEZI45_24790Not AvailablePositive5350074 - 535059819158.5
hypothetical proteinEZI45_24795Not AvailableNegative5350647 - 535105415110.9
hypothetical proteinEZI45_24800Not AvailableNegative5351051 - 53512938666.4
hypothetical proteinEZI45_24805Not AvailableNegative5351290 - 535159210754.6

Displaying genes 241 – 250 of 6099 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.