Delftia tsuruhatensis strain 11304

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Betaproteobacteria

Order

Burkholderiales

Family

Comamonadaceae

Genus

Delftia

Description

Delftia tsuruhatensis strain 11304 is a notable bacterium primarily found in the roots of plants. This strain possesses a single replicon, indicating a streamlined genomic structure, which may contribute to its adaptability and efficiency in its habitat. It is characterized by the presence of flagella, allowing for motility, which can be advantageous for colonizing root environments and interacting with plant hosts. The strain has been identified in association with specific plant hosts, namely Triticum aestivum (common wheat) and Ipomoea batatas (sweet potato). This association suggests a potential role in plant-microbe interactions, which might include promoting plant growth or influencing nutrient uptake in these crops. The accession number for this strain is SMMJ00000000.1, which serves as a reference for genetic and genomic studies. Understanding the characteristics and ecological roles of Delftia tsuruhatensis strain 11304 may provide insights into its potential applications in agriculture, particularly in enhancing the health and productivity of economically important plants like wheat and sweet potato. The presence of flagella further indicates its capability to navigate and establish itself within the complex root microbiome, potentially playing a role in the overall health of the plant ecosystem.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassBetaproteobacteria
OrderBurkholderiales
FamilyComamonadaceae
GenusDelftia
SpeciesDelftia tsuruhatensis
Strainstrain 11304

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Delftia tsuruhatensis strain 11304
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
Habitatroots
Biotic relationshipNot Available
Host(s)Homo sapiens, Triticum aestivum, Ipomoea batatas
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Delftia tsuruhatensis strain 11304 scf_39096_215, whole genome

Gene Summary

Adenine Count

1098172 bp

Thymine Count

1099782 bp

Guanine Count

2208383 bp

Cytosine Count

2209339 bp

Genome Length

6615676 bp

Protein-coding Genes

5817 genes

Non-Coding Genes

282 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
phage tail tape measure proteinEZI45_04690Not AvailablePositive1042012 - 1047006176269.0
hypothetical proteinEZI45_04695Not AvailablePositive1047003 - 104793834579.9
hypothetical proteinEZI45_04700Not AvailablePositive1047916 - 104861725008.4
hypothetical proteinEZI45_04705Not AvailablePositive1048617 - 104973239837.2
hypothetical proteinEZI45_04710Not AvailablePositive1049729 - 105027120070.8
tetr/acrr family transcriptional regulatorEZI45_04715Not AvailablePositive1050421 - 105112825830.6
acyl-coa dehydrogenaseEZI45_04720Not AvailablePositive1051191 - 105299665543.7
duf2147 domain-containing proteinEZI45_04725Not AvailablePositive1053077 - 105351715622.8
3-hydroxyacyl-coa dehydrogenase/enoyl-coa hydratase family proteinEZI45_04730Not AvailablePositive1053572 - 105597486204.8
acetyl-coa c-acyltransferaseEZI45_04735Not AvailablePositive1056143 - 105733941446.1

Displaying genes 1181 – 1190 of 6099 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.