Actinomadura rubrisoli strain H3C3

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Streptosporangiales

Family

Thermomonosporaceae

Genus

Actinomadura

Description

Actinomadura rubrisoli strain H3C3 is a Gram-positive bacterium known for its unique ecological niche. This strain is characterized by having a single replicon, which is an important feature that can influence its genetic stability and replication efficiency. The strain is cataloged under the accession number SMKU00000000.1, which serves as a reference for researchers studying its genetic and phenotypic characteristics. As a member of the Actinomycetaceae family, Actinomadura rubrisoli is part of the diverse group of bacteria that are often found in soil environments. These organisms play a crucial role in the decomposition of organic matter and the recycling of nutrients, contributing to soil health and fertility. The Gram-positive nature of this strain suggests that it has a thick peptidoglycan layer in its cell wall, which can provide resistance to certain environmental stresses and may influence its interactions within the soil microbiome. Overall, the traits of Actinomadura rubrisoli strain H3C3 highlight its potential importance in soil ecosystems. Its Gram-positive status and single replicon may facilitate its survival and functionality in challenging environments, indicating a role in maintaining soil biodiversity and contributing to various biogeochemical processes. Understanding the characteristics of this strain could provide insights into its ecological functions and applications in bioremediation and agriculture.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderStreptosporangiales
FamilyThermomonosporaceae
GenusActinomadura
SpeciesActinomadura rubrisoli
Strainstrain H3C3

Profile

Physiology
Gram staining propertiesGram-positive
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Actinomadura rubrisoli strain H3C3

Gene Summary

Adenine Count

1451967 bp

Thymine Count

1453774 bp

Guanine Count

3668552 bp

Cytosine Count

3652892 bp

Genome Length

10227186 bp

Protein-coding Genes

8952 genes

Non-Coding Genes

172 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
duf1772 domain-containing proteinE1298_46175Not AvailablePositive9987651 - 998817517928.8
duf5063 domain-containing proteinE1298_46190Not AvailableNegative9989088 - 998963620167.3
recombination protein recrE1298_46195Not AvailableNegative9989629 - 999022821826.4
ybab/ebfc family nucleoid-associated proteinE1298_46200Not AvailableNegative9990275 - 999067613149.5
tetratricopeptide repeat proteinE1298_46205Not AvailablePositive9991479 - 999379681960.9
hypothetical proteinE1298_46210Not AvailablePositive9994217 - 999498128372.2
(deoxy)nucleoside triphosphate pyrophosphohydrolaseE1298_46215Not AvailablePositive9995034 - 999542014090.9
nlpc/p60 family proteinE1298_46220Not AvailableNegative9995473 - 999636631027.8
abc transporter permeaseE1298_46225Not AvailablePositive9996386 - 999722530383.0
sensor histidine kinaseE1298_46230Not AvailablePositive9997265 - 999879155377.5

Displaying genes 8871 – 8880 of 9124 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.