Actinomadura rubrisoli strain H3C3

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Streptosporangiales

Family

Thermomonosporaceae

Genus

Actinomadura

Description

Actinomadura rubrisoli strain H3C3 is a Gram-positive bacterium known for its unique ecological niche. This strain is characterized by having a single replicon, which is an important feature that can influence its genetic stability and replication efficiency. The strain is cataloged under the accession number SMKU00000000.1, which serves as a reference for researchers studying its genetic and phenotypic characteristics. As a member of the Actinomycetaceae family, Actinomadura rubrisoli is part of the diverse group of bacteria that are often found in soil environments. These organisms play a crucial role in the decomposition of organic matter and the recycling of nutrients, contributing to soil health and fertility. The Gram-positive nature of this strain suggests that it has a thick peptidoglycan layer in its cell wall, which can provide resistance to certain environmental stresses and may influence its interactions within the soil microbiome. Overall, the traits of Actinomadura rubrisoli strain H3C3 highlight its potential importance in soil ecosystems. Its Gram-positive status and single replicon may facilitate its survival and functionality in challenging environments, indicating a role in maintaining soil biodiversity and contributing to various biogeochemical processes. Understanding the characteristics of this strain could provide insights into its ecological functions and applications in bioremediation and agriculture.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderStreptosporangiales
FamilyThermomonosporaceae
GenusActinomadura
SpeciesActinomadura rubrisoli
Strainstrain H3C3

Profile

Physiology
Gram staining propertiesGram-positive
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Actinomadura rubrisoli strain H3C3

Gene Summary

Adenine Count

1451967 bp

Thymine Count

1453774 bp

Guanine Count

3668552 bp

Cytosine Count

3652892 bp

Genome Length

10227186 bp

Protein-coding Genes

8952 genes

Non-Coding Genes

172 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
trna lysidine(34) synthetase tilsE1298_28770Not AvailableNegative6294727 - 629583337529.5
coenzyme f420 biosynthesis-associated proteinE1298_28775Not AvailableNegative6295878 - 629699040625.7
d-alanyl-d-alanine carboxypeptidase/d-alanyl-d-alanine-endopeptidaseE1298_28780Not AvailableNegative6297126 - 629843943780.5
inorganic diphosphataseE1298_28785Not AvailablePositive6298656 - 629914718664.1
nlpc/p60 family proteinE1298_28790Not AvailableNegative6299298 - 630059646423.1
hypothetical proteinE1298_28795Not AvailableNegative6300705 - 630249562489.4
nerd domain-containing proteinE1298_28800Not AvailableNegative6302741 - 630344225561.3
merr family transcriptional regulatorE1298_28805Not AvailablePositive6303613 - 630425923084.4
sensor histidine kinase kdpdE1298_28815Not AvailablePositive6305902 - 630852392247.1
response regulatorE1298_28820Not AvailablePositive6308520 - 630919424723.9

Displaying genes 5551 – 5560 of 9124 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.