Actinomadura rubrisoli strain H3C3

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Streptosporangiales

Family

Thermomonosporaceae

Genus

Actinomadura

Description

Actinomadura rubrisoli strain H3C3 is a Gram-positive bacterium known for its unique ecological niche. This strain is characterized by having a single replicon, which is an important feature that can influence its genetic stability and replication efficiency. The strain is cataloged under the accession number SMKU00000000.1, which serves as a reference for researchers studying its genetic and phenotypic characteristics. As a member of the Actinomycetaceae family, Actinomadura rubrisoli is part of the diverse group of bacteria that are often found in soil environments. These organisms play a crucial role in the decomposition of organic matter and the recycling of nutrients, contributing to soil health and fertility. The Gram-positive nature of this strain suggests that it has a thick peptidoglycan layer in its cell wall, which can provide resistance to certain environmental stresses and may influence its interactions within the soil microbiome. Overall, the traits of Actinomadura rubrisoli strain H3C3 highlight its potential importance in soil ecosystems. Its Gram-positive status and single replicon may facilitate its survival and functionality in challenging environments, indicating a role in maintaining soil biodiversity and contributing to various biogeochemical processes. Understanding the characteristics of this strain could provide insights into its ecological functions and applications in bioremediation and agriculture.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderStreptosporangiales
FamilyThermomonosporaceae
GenusActinomadura
SpeciesActinomadura rubrisoli
Strainstrain H3C3

Profile

Physiology
Gram staining propertiesGram-positive
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Actinomadura rubrisoli strain H3C3

Gene Summary

Adenine Count

1451967 bp

Thymine Count

1453774 bp

Guanine Count

3668552 bp

Cytosine Count

3652892 bp

Genome Length

10227186 bp

Protein-coding Genes

8952 genes

Non-Coding Genes

172 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
cytosine deaminaseE1298_23785Not AvailablePositive5188040 - 518924543102.8
duf308 domain-containing proteinE1298_23790Not AvailableNegative5189229 - 518981019774.1
tannase/feruloyl esterase family alpha/beta hydrolaseE1298_23795Not AvailableNegative5189897 - 519147455253.8
tetr/acrr family transcriptional regulatorE1298_23800Not AvailablePositive5191763 - 519292342748.4
hypothetical proteinE1298_23805Not AvailableNegative5192956 - 519525982876.1
rhodanese-like domain-containing proteinE1298_23810Not AvailablePositive5195359 - 519575714010.4
hypothetical proteinE1298_23815Not AvailablePositive5195760 - 519617615536.3
response regulator transcription factorE1298_23820Not AvailableNegative5196143 - 519683224762.1
two-component sensor histidine kinaseE1298_23825Not AvailableNegative5196836 - 519806543225.1
cpbp family intramembrane metalloproteaseE1298_23830Not AvailableNegative5198092 - 519895229250.1

Displaying genes 4601 – 4610 of 9124 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.