Actinomadura rubrisoli strain H3C3

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Streptosporangiales

Family

Thermomonosporaceae

Genus

Actinomadura

Description

Actinomadura rubrisoli strain H3C3 is a Gram-positive bacterium known for its unique ecological niche. This strain is characterized by having a single replicon, which is an important feature that can influence its genetic stability and replication efficiency. The strain is cataloged under the accession number SMKU00000000.1, which serves as a reference for researchers studying its genetic and phenotypic characteristics. As a member of the Actinomycetaceae family, Actinomadura rubrisoli is part of the diverse group of bacteria that are often found in soil environments. These organisms play a crucial role in the decomposition of organic matter and the recycling of nutrients, contributing to soil health and fertility. The Gram-positive nature of this strain suggests that it has a thick peptidoglycan layer in its cell wall, which can provide resistance to certain environmental stresses and may influence its interactions within the soil microbiome. Overall, the traits of Actinomadura rubrisoli strain H3C3 highlight its potential importance in soil ecosystems. Its Gram-positive status and single replicon may facilitate its survival and functionality in challenging environments, indicating a role in maintaining soil biodiversity and contributing to various biogeochemical processes. Understanding the characteristics of this strain could provide insights into its ecological functions and applications in bioremediation and agriculture.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderStreptosporangiales
FamilyThermomonosporaceae
GenusActinomadura
SpeciesActinomadura rubrisoli
Strainstrain H3C3

Profile

Physiology
Gram staining propertiesGram-positive
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Actinomadura rubrisoli strain H3C3

Gene Summary

Adenine Count

1451967 bp

Thymine Count

1453774 bp

Guanine Count

3668552 bp

Cytosine Count

3652892 bp

Genome Length

10227186 bp

Protein-coding Genes

8952 genes

Non-Coding Genes

172 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
phosphogluconate dehydrataseE1298_18960Not AvailablePositive4129127 - 413094463305.8
glucokinaseE1298_18965Not AvailablePositive4131049 - 413205034008.9
bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolaseE1298_18970Not AvailablePositive4132047 - 413271222159.8
ppox class f420-dependent oxidoreductaseE1298_18975Not AvailablePositive4132825 - 413325315975.4
two-component sensor histidine kinaseE1298_18980Not AvailablePositive4133578 - 413476541538.1
response regulator transcription factorE1298_18985Not AvailablePositive4134762 - 413542423095.2
peptidase m28E1298_18990Not AvailableNegative4135437 - 413660939679.0
duf1707 domain-containing proteinE1298_18995Not AvailableNegative4136712 - 413727820573.8
padr family transcriptional regulatorE1298_19000Not AvailableNegative4137281 - 413806627457.8
marr family transcriptional regulatorE1298_19005Not AvailableNegative4138236 - 413876918909.8

Displaying genes 3681 – 3690 of 9124 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.